Protein Info for mRNA_7218 in Rhodosporidium toruloides IFO0880

Name: 15586
Annotation: K20405 NPRL2 nitrogen permease regulator 2-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 571 PF06218: NPR2" amino acids 19 to 340 (322 residues), 250.4 bits, see alignment E=1.6e-78 amino acids 348 to 520 (173 residues), 46.3 bits, see alignment E=1.4e-16

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (571 amino acids)

>mRNA_7218 K20405 NPRL2 nitrogen permease regulator 2-like protein (Rhodosporidium toruloides IFO0880)
MVLNRQSLKEESGSYTPRLVAVFYAVFDPTVGPRVVHQIPEGSVATALSTIPSRSETPAN
EPRASLSPAPAASRGVDPTDDAAPRANPVLFDFASIIDFVIPKPELCGHLITKATRTSKI
LGFPVRIVDEEKYHGSQAVYNRNAFIFNLCFVFERDAELSVFEPVVRKTGRTLREMEEQS
SLLSSPPPTFSMANLLEQLYLDLNAYCETSIPLVDTDLVLGLFPFYANPPDVKIWDVPLA
VANIEQLKSYSWDVTLFKICSFIDGVNHVKRIAELAEVDLYLARQCIQHLVYYNAVIIVD
IFQFSNSYAVLPDIADVAQYGEEDEEGVTDLRTECENYVFNGSRDATPVPFATLLTYYSR
LRSGLAISDWMDDLSLDTQPIDVRRMIQFGVIKGFLRRVHAFPVWLDHPTLRPRSAISET
AGTAASAAANGRRRHRGSNTSAKRRLETSLDGAQPPRDAPARPQHSTLAQPAFEPAALPE
DDDPTGPLVTYPHSLTLMFDGSHHTDEICLKYSCSWRTLEMVLRDLGSKGGRGDQLESED
DEERFADGKRRGSLGLEKEGVYGERVVMMFV