Protein Info for mRNA_7222 in Rhodosporidium toruloides IFO0880

Name: 15590
Annotation: KOG1572 Predicted protein tyrosine phosphatase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 202 PF03162: Y_phosphatase2" amino acids 19 to 155 (137 residues), 124.8 bits, see alignment E=1.4e-40

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (202 amino acids)

>mRNA_7222 KOG1572 Predicted protein tyrosine phosphatase (Rhodosporidium toruloides IFO0880)
MATLVDSLVARRDTQGVLFPPLNFAMVVPGVYRSGHPNKGNFPFLDTLNLKSIMYLSTDN
YRHDTYTWARQKGLKIVHLRLDISKDPAVEVDPELIKKAIEVVLDSRNLPILIHDNKGRI
VPSIISAILRLMCDWTLDAALAEYRKFFPSTEDWVHDDPAEIEKGAKKKKDKERIADLRL
IERFDLRSIEYDPDYAPSWLER