Protein Info for mRNA_7256 in Rhodosporidium toruloides IFO0880

Name: 15624
Annotation: BLAST protein kinase-like domain containing protein [Rh...

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 617 transmembrane" amino acids 48 to 65 (18 residues), see Phobius details amino acids 107 to 125 (19 residues), see Phobius details amino acids 145 to 163 (19 residues), see Phobius details amino acids 243 to 261 (19 residues), see Phobius details amino acids 299 to 316 (18 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (617 amino acids)

>mRNA_7256 BLAST protein kinase-like domain containing protein [Rh... (Rhodosporidium toruloides IFO0880)
MTTLLQLLRSGLHPPRLPFPVPPAPEDDGVPQPAPAVSYDEEWMPRHILQIDSLVSLATG
SFLYGVSNRLAELGKADPVVPADILQGFEAGFRWFARRLDSVREEDIRVAIAALMQPLLD
LVPFIDETLELPTDYSEAAVSVRRLVPIPLTMHSALLTDVLLVRRTGDFQGRRFMSSGTI
ERPPPSQATSMPLQQRSHRLTAPISYEERSSGRLQRLDTLLRRPRGLAFSRDKWESGTEV
CTLVYQASLAAQAFLHCMFYFTDASNFSIAFNCFFGDARVIAISPLHTLSRPASVAPEAH
PSFLLTILASFFPTFFPHDRLRDLVVEKVDAYGILPNRSSWLPLSENPPLPQLSQLGDGG
ATENERTGLGGPSEVGRSLSTQSGQLVPLDFLARDPIYRTPFYWFKKVDIPSDLGSLASP
RPFGPPISPAPPAIRFGRLIRRGTTSEVWEGKLGDSQLVVKYVHGQLPSAVQHLLNDRDI
FAKFKPAIDEVGVGLEGLWQSEIGDVIGVGPYGGQSPEQWSAYTQDQRLQVFLKLLILHQ
RIGLIHGGARPSATVITKSSSGSDLVRWVDISAATEHAEPCGGLSCNELRRCLMSMCFSG
EMLDKLRDEVEALGLIL