Protein Info for mRNA_7287 in Rhodosporidium toruloides IFO0880

Name: 15655
Annotation: KOG1650 Predicted K+/H+-antiporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 998 transmembrane" amino acids 57 to 74 (18 residues), see Phobius details amino acids 86 to 106 (21 residues), see Phobius details amino acids 118 to 140 (23 residues), see Phobius details amino acids 151 to 173 (23 residues), see Phobius details amino acids 185 to 205 (21 residues), see Phobius details amino acids 217 to 243 (27 residues), see Phobius details amino acids 249 to 269 (21 residues), see Phobius details amino acids 290 to 307 (18 residues), see Phobius details amino acids 313 to 329 (17 residues), see Phobius details amino acids 340 to 357 (18 residues), see Phobius details amino acids 369 to 392 (24 residues), see Phobius details amino acids 404 to 427 (24 residues), see Phobius details amino acids 434 to 459 (26 residues), see Phobius details PF00999: Na_H_Exchanger" amino acids 66 to 450 (385 residues), 186.1 bits, see alignment E=4.6e-59

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (998 amino acids)

>mRNA_7287 KOG1650 Predicted K+/H+-antiporter (Rhodosporidium toruloides IFO0880)
MSATVPDVAKVTTTIVAAAHATVTATMPAVPKATAAAASVFDKGFGSPVKFDSSNPLVLF
IVQAFIIVALSRLLHFFLRYLRQPKVIAEVIAGILIGPSAMGRIPGFTSTIFPAQSVPFI
NLVANLGLVLFLFLVGIEVDFSLFRRNVKLSTSISFVGLVVPFALGAAISKGIYERFIDD
SKVHFGTFLLFVATAMAITAFPVLARILTDEHLLQNYVGVVVLSAGVGNDVVGWVLLALA
IALTNASTGLIVLYVLLTAFGWILLLWFVARPILKYLGRKTRSFGEHGPSQSMTAFTLFL
VLTSAWITDRIGIGHAIFGAFLVGLVVPKEIRGPLTEKIEDLVTVLFLPLYFALSGLKTD
LGLLKDGSIWGWTFAVIIVAFLSKFLSCGLVAKGFGLDWRESGAVGSLMACKGLVELIVL
NVGLNAGILNPPVFAMFVVMALVTTFATTPLTLAFYPVWYRIKSDRERRGLPSTPTDKAS
TSTFGDEKPRSRFAVVVEQFEHLPAVMAFLRLVQAPAPVEAGKKLALTSTAEDQKDQSDA
TTALNGTLSTLLQIAFLRLVELTDRTSALLRAAESESTLLRSDALSTVVRAFANGLGVKT
RSMALAIVAQEGYSRQVAEFAEESESEVVVLPWALPVATSSTAAVPAGSTQPQASTSTQA
GVAESWIPNPLEAYFNGTGSSRASTMTIQGAVGYASYLREVYAEAPCDVAVFIDRSDAAA
SSDVPTSAGQAHLFLAFHGGSDDRLALGLLVQLVTANPGHTATVVRIERSAELTQHDREV
LGVSSDEDGLASKTATRDDGASQSDQPLFTIHSGANAGDTVYPTLATGATRGVQSETEDD
VLLARFFGSNTDDSSTRLDASIRDRIDYSDVSSSQPLHFALARLATIRATLQSSALSSGS
RIPLVVFAGRGRRDAPSHKSELTALLKERAGTVYRSVVAASEVRRALGDAATALVLSSEE
GPASVEERIVVVQRSGKRGRVPGTLAYGAGEMAKGKDA