Protein Info for mRNA_7441 in Rhodosporidium toruloides IFO0880

Name: 15809
Annotation: K08884 K08884 serine/threonine protein kinase, bacterial

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 288 PF00069: Pkinase" amino acids 81 to 277 (197 residues), 205.1 bits, see alignment E=1.4e-64 PF07714: Pkinase_Tyr" amino acids 83 to 284 (202 residues), 148.5 bits, see alignment E=2.3e-47

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (288 amino acids)

>mRNA_7441 K08884 K08884 serine/threonine protein kinase, bacterial (Rhodosporidium toruloides IFO0880)
MQSRYSQHPQQPSHASPSRSSVQQPSHPSPSSRFTQRSTLSSRSGGSGGSGGSGGAQSMR
SDRTGSSGEYNRNADPAELFVRQERIGKGSFGEVYKGYSVRTGKAVAIKVIDLEDAEDEI
EDIQSEISILSSLDSPFVTKYEGSWLRGTELWIVMEYLQGGSCGDLLKPGVFKEDYIAII
CRELLKGLEYLHGEGKLHRDIKAANVLLSASGDVKLADFGVSGQLTATMTKKNTFVGTPY
WMPPEVIKQSGYDSKADIWSLGITAIEMAKGEPPYAELHPMKVSAEAC