Protein Info for mRNA_7477 in Rhodosporidium toruloides IFO0880

Name: 15845
Annotation: K07243 FTR, FTH1, efeU high-affinity iron transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 429 transmembrane" amino acids 6 to 31 (26 residues), see Phobius details amino acids 62 to 88 (27 residues), see Phobius details amino acids 100 to 121 (22 residues), see Phobius details amino acids 162 to 186 (25 residues), see Phobius details amino acids 193 to 212 (20 residues), see Phobius details amino acids 221 to 244 (24 residues), see Phobius details amino acids 307 to 327 (21 residues), see Phobius details PF03239: FTR1" amino acids 8 to 327 (320 residues), 206.8 bits, see alignment E=2.3e-65

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (429 amino acids)

>mRNA_7477 K07243 FTR, FTH1, efeU high-affinity iron transporter (Rhodosporidium toruloides IFO0880)
MGGTIFSVPIFFVVFREVVEAGIVVSILLSLVDGMSSGHQDGAADPEEAEAVRLRVRKRM
RWMVWAGALSGLAIAACIGAAFIAVFFTTLSDLWSKSEDLWEGIFCLIACVLIYIMSLGM
LRIDRSQIKWKAKFAAAFAPQEGDQKLTAHERKQGRRGKWSLFILPFVTVLRESLEMVVF
VGGVSLGQSAKSIPLAAITGLIVGFVIGYLIFASGSRVNLSIFLVVSTSILLLIGAGLCS
RGVWFFQQYRLVRGVGGDLGEVGDGPGSFDPTGSVWHLTYGNPENQLAGQGWSIFNALLG
WQNTATLGSVLSYVFYWLLVTFSLIYLKWSEGRTSFFGIYSKAGKRRLAKRREGKRDEET
VGTESGETKADSGLASIGEKDAVRKEEEGEIVELPGRPVLARGDTSLGSTSSVSSKVEGE
EEITEAPRR