Protein Info for mRNA_7511 in Rhodosporidium toruloides IFO0880
Name: 15879
Annotation: K01507 ppa inorganic pyrophosphatase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 74% identical to IPYR_CANAL: Inorganic pyrophosphatase (IPP1) from Candida albicans (strain SC5314 / ATCC MYA-2876)
KEGG orthology group: K01507, inorganic pyrophosphatase [EC: 3.6.1.1] (inferred from 76% identity to uma:UM06070.1)Predicted SEED Role
"Inorganic pyrophosphatase (EC 3.6.1.1)" in subsystem Phosphate metabolism (EC 3.6.1.1)
MetaCyc Pathways
- glyphosate degradation III (2/7 steps found)
- (aminomethyl)phosphonate degradation (2/8 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.6.1.1
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (286 amino acids)
>mRNA_7511 K01507 ppa inorganic pyrophosphatase (Rhodosporidium toruloides IFO0880) MSFSTRQIGAQNTLEFRTFLEKDGKVISPFHDVPLFANEDRTVLNMIVEIPRWSNAKLEI SKEEKFNPILQDTKKGKLRYVRNCFPHKGYIWNYGAFPQTWEDPAAQHPETKANGDNDPL DVCEIGETIGHVGQVKQVKVLGIMALLDEGETDWKVIVIDVNDPLAAKLNDIEDVERHMP GLIRATNEWFRIYKIPDGKPENTFAFSGEAKNRKYATEIVHECNEAWKRLIAGQADKGKI DISNTTNQSSPGYTTSTESVPADSRRPAAPIDASIDKTFFISGHAV