Protein Info for mRNA_7591 in Rhodosporidium toruloides IFO0880

Name: 15959
Annotation: Hypothetical Protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 997 transmembrane" amino acids 383 to 400 (18 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (997 amino acids)

>mRNA_7591 Hypothetical Protein (Rhodosporidium toruloides IFO0880)
MKLLPPRGDRLSVASTDTAFTSSSGVVRSAHQVAVLDDDLLLLLAKAPRTAHLAPPRPHL
ATSASSTAPSPPRLETLARHQCSPPETPPDMLPFRQAALFTFTPSTPSPVTAEHGLSARH
TLNVHDLDGEGRTWRVDASVAKVSIYKSKNLTLHLAGRILTSTVEVFESSDIHLLVGDPS
SASSSSPLGTLQLDPSLHNVSIQYASPANVGKVVLAPLLTEDSLAARSFGFSQLSLQAGS
NDEPFIVIDAEGRIRQPGEDGTVVSPLSPPAEMARQLVYSFNGGSWRVEGLERREKDYPN
LASCRRGPIAFLLACARFEVLLQEEKAGRLVPPFFFPNYALALAVAAHRPRLGATSERAH
EPQRYRLSLLDPSQRHRRRIQPAFAKASLIVTLLFFSQTLSPRTMPVEVGATYGIAVRLP
SFIAAAAAYEECKRTLGLLDVFIARSRFWRSKGGWQLGVPALYRLTPEIWTRIRRHTLDN
ALDTAERDFLADYLRLFNCGCSEDEGLTLPTKLRDVGRWWAKIECGHPDTADYRDRMVNM
KVKDRLEDVQRSTFLRPFNLTFDATAILHPDRLNLRSQHDLEMAILVSLPLHDPAMHYME
APFWDEDELYSDDLPTYNTALIALPTTLHTDSHAWFARAVQDYRLEPVDARHRQLAWKGF
AAADTPYGNGDIGRPFASARWRLKDAKLDQLPPRWMVHARSGCKPAMGGIEGAATVTASF
GVAVRFLSFVRAARAFEAVDGALRFLKTDAPAWRSAATAYPDMPLLRIPPETWTLVRNHL
VADALNQAEADLVQQVIQRAIQDRAGFIDEYAPTRLVEAELEDFVMNTGWEAPDDFGQVF
GPWSEAACDLVRHFGLAVDLRGFRPRHSVQGHNTDSSPSSAVFLKLPLADSSLDLECYTS
YDLVGAMGCLALPSNLPPGASTAFIKLITLFALEPVDVRFQRARFKSPFQEKSEEDASPR
LKLTEYGDDVEDGHFPSIPLNEVVPQWLIVGRLSAQM