Protein Info for mRNA_7717 in Rhodosporidium toruloides IFO0880

Name: 16085
Annotation: K17979 MDM31 mitochondrial distribution and morphology protein 31

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 751 transmembrane" amino acids 223 to 251 (29 residues), see Phobius details PF08118: MDM31_MDM32" amino acids 188 to 738 (551 residues), 630.3 bits, see alignment E=1.4e-193

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (751 amino acids)

>mRNA_7717 K17979 MDM31 mitochondrial distribution and morphology protein 31 (Rhodosporidium toruloides IFO0880)
MASLATSSRQPRWADVYRCFASLRPAPVASRVTERAFADAWRAARVSGRRGVMTTVVGGR
TPGSALLAGVRERGAGLASVRIGLDKRWIHCTAAGCPNNQSTRTFASSSPSSSSNPSPNP
PPSPDPRSPDRSRQKALAKPEPHPLAKPEPHPVVSTSAPHPAYLSSLSRSIRRAASALQT
PAGRPPPKEQLLSLTNSFFERLKIRFKWATIRSYRRFRADDYSAFFSFGILGTLGWFLLS
TTSAFALFFFVVNSLSLQEWIAGKLGSYLTDSTGVKVVFESAIVPKWGIFGKEGSRIVFK
NVYISRGPVKGELGVLPVLEQEHTDETEDEARLREMIAEWTHFHLSIDTVEVSLSLGRWL
DGKGLIKDAAVRGVRGVIERSHIVYDPNAPKDRFAYRNKPRPGDFWLEGLKIEDFLVTIY
QPENFRPYTFSIFNADIPRLRKQWLFYDLMSAEAVTGQIDNCLFSLHKPQSIGRTSEEDL
KDARWSRMSRFRIDGVPIDHMQSTADTGVLSWITSGRCDLVADIRFPREDTELDLSALVD
HLVDEIGERLSPSKEESDSRIPGRRSLSRDALQAPRNEDAEQVKKEERLKALRFAKETEK
AAAAASLGEDEDDEELHVGEDEEDRIVSIDLDIRFKDLKASVPYFTSDLSYVNNALIRPI
VAFINRNRTLIPIRCHIDLGLSEFNGSWTTYDVGILDRMSEQVYAALAHHVSQSNEQRLQ
TVGLWTLQMTANTVLGALKSNLTLAQDPLWH