Protein Info for mRNA_7841 in Rhodosporidium toruloides IFO0880

Name: 16209
Annotation: K04728 ATM, TEL1 ataxia telangiectasia mutated family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 500 1000 1500 2000 2500 3051 transmembrane" amino acids 1544 to 1567 (24 residues), see Phobius details amino acids 1966 to 1988 (23 residues), see Phobius details PF11640: TAN" amino acids 8 to 150 (143 residues), 117.6 bits, see alignment 8.2e-38 PF00454: PI3_PI4_kinase" amino acids 2730 to 2979 (250 residues), 176 bits, see alignment E=2e-55 PF02260: FATC" amino acids 3021 to 3051 (31 residues), 44 bits, see alignment (E = 2.3e-15)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (3051 amino acids)

>mRNA_7841 K04728 ATM, TEL1 ataxia telangiectasia mutated family protein (Rhodosporidium toruloides IFO0880)
MSVSRDFQEIVFELESDKIKERAEGVSRLREFLASKRNFNAINRDPSHSWIQTLQTLFGV
VIKERNAAVGKKSAATDKRLDDATQAVRWLVEKIHKSATRKVAKAIIAHLTQMTAVAGKL
QPYALTYMKALRTILSYPPHLEHLDERQWTDIVMLGFSGVLGDKIKIGQEFVDDAVMDID
EDERMGGALRASPEEELFLPAPAAGKARRTAHPVEIELLAVVEVAFRSRSSPFLVYAQAI
FRKFLRFFDAFPSETTAHVSALTALNRAFAEIDLNDQRSMRRIGPRLWKHILGLWSTKSA
TLKEQVVMALRYLFPFVVPATSTGGDEVSIARAKALYHAVLTEPTIRWREAFDIDIDHLR
LGLVLPTAAKPQPDEPRSKAYHAQTFRIGAGFDEKHAVAWGVVELGADALARIYEVEDAQ
REDRAVEAMLSPTQRGKRRKVEDPLSVLLDSLSEASLSNAAIAFRLQLLLFLVDRHWSSL
DFEACRRILDALVPVLSHLDTGVARWAFLAVAAIAHAGLPVEQTDELFSPISAGRRKRQQ
SAPSSPWEQIWLLALRKLATPEICRAAAHAANILLAHDRVSGPLLSESIEAFARDLDLQS
VNFPSDTVCLFLEWTLAISASDARLVRLGLSAKVVGWVTMAWSALDGIHRAHSFGHARPH
ADPISNGALASLIARLSGIPAIPTLRHDYVVPDCPIATMAIELSETYRIRDFLEAKLPVY
VQDDTVIDTLIRTPAYFDATGGAPEDLEHTTPRKVSTWLLRVLDGLKAAAADQGDPYWTG
ISSDLARRHLDLACLALVVEGVFATNRIPSNKATVRAACDILALLAPTLTLKKWLPDERA
YLLGSLSPILVEVPLKPDVEYPVLLDPGIASDLPQNVLPKRKPPSAALDLEGDGIVLLRA
IWKGDTSRLALEEILAALRFLLLEVTATDPNGSSKETTGSAFALSQAPSTQASERIKELE
QTQNGDGFDDVKYGSSRAIQVGSTGAATAPRAGAATVAMCIKGFVSAEMASVGTVRPVRI
QEVVDAILQSDGEESIVIAEQALAAVHAGLATFSLAQAQDILQHIGGELLPDYRYARNDA
FATLAIKFLECTTDHWIVVGEANEDFAGNARVLSSWIITSLRDKKVPSWRVRLKFLAFLD
RYIQLDQAQEHWDFRGSAPRSEDGHIISPTSIIPFMLSDADFRVRFRATTSTAELFNVCT
ALGVPVNDLFEDIRDNTTPDVSQLEQTLTQLLSSANLVVAAGSRRRSPYHLILELTGGAS
ETTAIALATLDGVAKRIGMESPADLYLAFARYIAWKAVRDAGNQPNAEIAHRLPYRACGF
PTLRDARKADFVKTASWLIQFGDPPEAFLTLCEILKRSPQEGRLDCFADSAALTICRFHA
RKAEDESLAYAELEQLLARLAEGAGASDAHQQGELLASTIDALISEILAQTFEERWAADE
PLPALSHDKQASDLFAELLRLPENLVFQVETASPHWKCRVTVPACLWVDSHYRVFSTPSA
VFSIVQNLLSRVHRAPFVSEKRRHLLNLALAIALSHSCVQRPAILASIVDGLASVLACTD
TFVLVGPMLRWALKSSLDATSKGDGPAFRPRLVEQLVRVAHAASSLRAELVDPQLVIIAQ
DLSKALDQSIRHLSKVGGTHIAEAALLWPHEVFSYASLSPPAVLDAIASSFAPVDKFDTI
ATIRRLPQYDALASGAEGPRLAWHLMQALKPGTEPKPPDSLAFAELLFDIGGEAERPAVD
DPAVAHAEVADVAVPDNDRGIKKLIVERLLAILHGAADRKLADAALTAARLALSVPDIVA
LCASSHPVNQQTAIVAQVISNPALARVHRTRTREARSLVELGSDEWLRRARLPDEWVTSF
AELLADVRAEGDDFYAQLVPLIRFSPIFSRQIIPSLVHSLLLRSAISGDEDMEKRLSTYV
ERLLSSTSTGRAVVRLVIDTAVYLRKHAHPNLQATSRSRCDTWLKIPWLLLAEGAVKIGS
WYTALLFLELAHEYDRLFTRNAKGQAFDQRLDDRAQALLYEVYAGIDEPDGFYGRESPNT
REALLRRYRHEGQWAEAFKIYGARHEAQSHHFGTSDPAATAGVITSLASFGFNRLALSLY
QPARLDGSIGETDVATGLPYDLGWRTDVWDLPLEDRALGSSSVSLYTALRTARTERDPAD
ARQSATDALVKEVAKLGAVSLDLPQPSSSTISTILALREVIRLSSFGEGEVLTAELVDTL
TLVPKKLGFEHAERILTTRISLLRGIRAKERVEQVGDEFSSALYKSANTAEQACLLELSR
VGRRSGQLQVALNAVTLAHTLAENGQAPHVDEELANVLWAQGEHRAAISLLTTVHEGFPQ
KAAALYARLGDWTADARIRDPKEILDEYFDPAIRALDRNAPSEERAQVHHAVAAFADAQY
GDLSVIAIERRRRLNAYQQRKELEFLEIDRQLQSGSTNSAPYAQSKKDAEHHIEEDRRQV
EDAEDTARTMLWRALDNYAQALQASDEFDDSVFRFCALWLACADNGEIHTALKPRLAAVP
SHKFVFLAYQLSARVTKPSQPTPATQNIRSLVQRLCNEHPFHALYPVNALRDSSGSRSSR
RSSASRESSIGAGGSASKGTNSRAQAANDIVEKAKRLDGLRHRIEAVELACAAYAEWASF
DIKRNTAYHDSRGAIKKGLQPIPRSMQLKAKVSNLPIPVTTFDLPVDPTGTYSDDSFPHI
VGYDDHFDTAGGIHVPKIVTCVGSDGKRYKQLLKGDDDIRQDAVMEQAFQLVNSLLARDD
AGRRRKLRIRTYKVVPLQNRNGLIEFVANTEPLGNFLARLYDEMAPGLPKQAREKLRSIE
AKHKGRHDQRDAEKTDAFKNILDKMPPLMRFLFWQRHKVPSLWFDMRLNYSRSVATTSII
GHIVGLGDRHVSNILMDVSKGELVHIDLGIAFDQGKRLPIPEKVPFRLTQNMIDGFGMSG
VDGVFRRCCEETLRVLRNRSNIVMTVLEVFKHDPLQSWAVSADMAKRIQGSDDGDAAALD
DLPDDADRALSIVRNKLDTRLSVEYRVNELIQEATNPSNLATIFSGWQPYL