Protein Info for mRNA_7846 in Rhodosporidium toruloides IFO0880

Name: 16214
Annotation: K04460 PPP5C serine/threonine-protein phosphatase 5

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 571 PF08321: PPP5" amino acids 182 to 277 (96 residues), 83.2 bits, see alignment E=4.1e-27 PF00149: Metallophos" amino acids 285 to 502 (218 residues), 92.3 bits, see alignment E=1.9e-29

Best Hits

KEGG orthology group: K04460, protein phosphatase 5 [EC: 3.1.3.16] (inferred from 55% identity to scm:SCHCODRAFT_82662)

Predicted SEED Role

No annotation

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.3.16

Use Curated BLAST to search for 3.1.3.16

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (571 amino acids)

>mRNA_7846 K04460 PPP5C serine/threonine-protein phosphatase 5 (Rhodosporidium toruloides IFO0880)
MSFSNDSSPTSSLPGSPESATSLSSLAESSEYRAPLSGEAPEPSIDGTSVGGGEGGIRAS
SADEINEDDKKLALSLKSQANSHFTASRYREALDMYTASLNKNPFDPIVWSNRAAVRLKL
EEHGLAIADSTRAIELDSRAVKAYYRRAIANLAILKPKAALVDFKQVMKLDPNNAPARTQ
MEATQKLIKRLAFEAAIAGKEEEPMSIKMRKMVEEGASPLSADYTGPRLADDERITPEFI
DSMIQYFKDGNLIPKRISWQILLGAYDALKEEESLVDVPIPEGQTVDVIGDCHGQYYDFM
HLLSLTGKPSETHSLVFDGDLVDRGSWSTEILLTVLAYKWLYPRNVFINRGNHETTDMNR
VYGYEGEATKKYGVQMYKLSEEIFTALPLATLITASAPPRIDASPNPPNPTLYQGVKRFF
VVHGGLFSKDGVTLDDIRSIPRMSLKQPGQEGLMCEALWADPQDAPGRGPSKRGVGLGFG
PDVTRRWTDENEVTAVIRAHEVRQGGYSVEHDGRLITVFSAPNYVDQVGNLAAFVRIDET
GEMKFTTFEAQPHPTHIRPMMYAGGMMGLGM