Protein Info for mRNA_7954 in Rhodosporidium toruloides IFO0880

Name: 16322
Annotation: K01282 E3.4.14.- dipeptidyl aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1002 transmembrane" amino acids 116 to 137 (22 residues), see Phobius details PF00930: DPPIV_N" amino acids 238 to 672 (435 residues), 242.3 bits, see alignment E=1e-75 PF02129: Peptidase_S15" amino acids 729 to 872 (144 residues), 23.9 bits, see alignment E=4.5e-09 PF00326: Peptidase_S9" amino acids 770 to 967 (198 residues), 155.8 bits, see alignment E=1.8e-49

Best Hits

Predicted SEED Role

"Dipeptidyl peptidase IV"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1002 amino acids)

>mRNA_7954 K01282 E3.4.14.- dipeptidyl aminopeptidase (Rhodosporidium toruloides IFO0880)
MSSYTPLPVELGDSKSAAGPSGRQTRADSSLLSRLLVVPDPFAPPVEWHGSRDGADESSD
SGIDEDEYDEKAGRSAGGRRDVEGAGEDEEEEDLGWTEGLLSGKKTKGTEARKRRLLLLA
LLPTSLILLSLILFSTLSSPFHLSTSSLLTSNGAHTYVGEAGKKVMSLDELRNGTFWTDK
VEIEWLAEAGDGVYSQKTSSGSILLTDLNANSSRVLVEGDEVRDPRGRKVDWAQFKLSAD
GKVVLFNTDWTKVWRHSTLSNFHLFPLTSSSSRPSALPLFSPSYPPKTYTAHFSPTSHHL
AFVHENDLYVLPAEEWDEVLREREGDAVGERAVRVTREGSRVRMSGRPPWVYEEEIFSSD
STLYWSPSSSYLAFLSFDESDVPIYEYPVYNSDPNEVGGEEYPGKVEVPYPKAGYPNPLV
TIHIFSLTHYLSLPHPSSASSSLLTLTLPFTDLSPADTVITEVAWVSEKEVLVRVTDREA
RRERVVVWDLEGVWVDGREGAREVRGRVVRDVDWVKRDGGWAEASQTIVPLLPPSSASSS
SAPIPSYPPGYLDIVPSPSGFNHIAYFSPADAGEPVFLTEGEWEVDGRIERVDLERGLVY
FIAARPSTSRHLLTVPLPRSILELESLRSGRTKLVEPKSLTGVNGEDGYHSVSVSPGGGV
WLVNYEGPGVPWQKLFKASDPSFSLTLTDNAPLSSVDSQYQHANLVYSSLAIPTGEKRRG
EDETVEVNVVEIRPPGMDESGRTRYPVLFQVYGGPNSQMVNTRWQRDFQHYLSLQHNYII
VRIDPRGTGFRGRKFRTAVRGRLGELEARDVVETARRWAARRYVDEKRIGVWGWSYGGFL
TSKIIETNSSVFSLGMAVAPVTDWRLYDSLYTERYMYTPAHNPVGYTNSSIHGMDGFKHA
HFALAHGSSDDNVHFQQSALLLDRMTMAEVRDFRFRMFTDSDHSISTRNAYWELMRWLES
FLIEKFGEGGRPKTRTQLKTEHGAVPDPALGLSDREKEREKE