Protein Info for mRNA_8037 in Rhodosporidium toruloides IFO0880

Name: 16405
Annotation: K14797 ENP1, BYSL essential nuclear protein 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 438 PF05291: Bystin" amino acids 138 to 426 (289 residues), 451.3 bits, see alignment E=7.5e-140

Best Hits

KEGG orthology group: K14797, essential nuclear protein 1 (inferred from 48% identity to phu:Phum_PHUM167440)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (438 amino acids)

>mRNA_8037 K14797 ENP1, BYSL essential nuclear protein 1 (Rhodosporidium toruloides IFO0880)
MPKAAGPRKGATLKHDPLAVQLRAGELDDSGVLSAPGKRQKTKKHHQQEETALDAKVTRK
VLAMAREQQDELADEDLGAFAADVDSRDDQQLREGEEEEDDGAFSDEDDYEEYEELEIED
DDEALLNSYVPQGQLEPGRTLADLIMEKIGQAEQPAPRELAAAESSREPPPGFNPKVIEV
YTKVGTLLSRYKSGPLPKAFKILPTLAIWPQLVMLTNPETWTPHATYAATRIFASNLEPK
QSQKFYKEILLPKVREEIGETGKLSVHTYMALKKAIYKPAAFFKGLLFPLCESGTCTLRE
AAILGSVLTKVSVPVLHSGAALLKLAEMDYTGPNSIFIRVLLDKKYALPYKVVDSLVFHF
IRFKRDPRTLPVLWHQAFLVFVQRYKSDLTAEQKEALLEVLRYKSHHQITPEIRREITHS
VARGEEILQADTMEVEIQ