Protein Info for mRNA_8069 in Rhodosporidium toruloides IFO0880

Name: 16437
Annotation: K11240 MSG5 tyrosine-protein phosphatase MSG5

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 970 PF00782: DSPc" amino acids 513 to 578 (66 residues), 55.6 bits, see alignment 2.6e-19

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (970 amino acids)

>mRNA_8069 K11240 MSG5 tyrosine-protein phosphatase MSG5 (Rhodosporidium toruloides IFO0880)
MQLDTGFTGSLRAALDASPVSPASLTAGATVSEAKTDVLPHLPTPRRSPPRLNLQAVSPS
TTASQADASGPALYIQPASPGVSIFAALSASPTSPDPIPIPSTSTISSSPPSYTPSFQPL
PSPTASAGGLAARRAARLGKKRLSLVVPPNPHSSLPTASGAPPQLLSPLTPSYLRPSDNL
DAETRSLPPSPVSLTTFIGPEGSEAPDRTIGRLMFKQQADEMREQMRGGRGMKRRTSIPR
LNLVKSGAALAQPANLDNLAPPTTEAGTASAVSAVQLIRANGIEREGGDETLEEFPYAFG
PREILPGVFLGSEQNAKDPAVLRDWKIGFVLNVAKEVDCPWTAESSDEEVDMEVEQMKEL
RLDEVQDTTPVAKPTPRPSPPRPSGSKHRRTKTQAVIPSANVSSTPSKEPSPSRVPVRPA
FIRPTASTPNLHASFQPLSPPPVPPIPSPVVSPLPTPTNDFDAPQRSLSTSPPHSRRPTP
RLVPIRAHTHPRTTTRSVDAVRFPPNPRSGRPELEYLWLKWGHDEADLVEAQKFQAAFDF
LDEARERGERTLVHCQCGVSRSATVVIAYCMREAAKALEEGRDARELAGCTGMHDTYSFV
KEKSEWVGPNLSLVFQLVAYERTLRGDNGGEDDAYAHSAYPPEPSQEDDQGLPPPTPADS
FRPFAFPLPSRHQSSFPSPRTPMSEGSMADSQLSTPDLHDPLISPTFSIGTRTSSVTSTP
LSVDRILPPSVRIVRSDDGAEQGGRYRQNGIRDRHSSLETVVAEQDEDEQRVEDKAEKGA
FVLSVPPISAFAPQYAEMASPTVAIHPHQQRPEGDTLKQSATLPPRSSSSKSTGTPSISL
NGLPPLTVPPLTAGDPASLGYPPTSLPPSRRESLITLTSPLSATSTTSSTTSLSSSGLAR
TNSGRRFGAGQTPSERKASHRRVCSDTIRVPSPHLFSPTSSTGAGASPLSVSTPELEASP
VRTRSTEDDV