Protein Info for mRNA_8185 in Rhodosporidium toruloides IFO0880

Name: 16553
Annotation: K02359 EGH egghead protein (zeste-white 4 protein)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1014 transmembrane" amino acids 114 to 132 (19 residues), see Phobius details amino acids 175 to 194 (20 residues), see Phobius details amino acids 257 to 276 (20 residues), see Phobius details amino acids 282 to 307 (26 residues), see Phobius details amino acids 323 to 342 (20 residues), see Phobius details amino acids 373 to 393 (21 residues), see Phobius details amino acids 405 to 407 (3 residues), see Phobius details amino acids 412 to 433 (22 residues), see Phobius details amino acids 447 to 469 (23 residues), see Phobius details amino acids 586 to 606 (21 residues), see Phobius details amino acids 622 to 642 (21 residues), see Phobius details amino acids 900 to 924 (25 residues), see Phobius details amino acids 936 to 959 (24 residues), see Phobius details amino acids 971 to 997 (27 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 69 to 465 (397 residues), 61 bits, see alignment E=1.7e-20 PF13641: Glyco_tranf_2_3" amino acids 731 to 892 (162 residues), 49.8 bits, see alignment E=6.5e-17 PF13632: Glyco_trans_2_3" amino acids 749 to 950 (202 residues), 94.3 bits, see alignment E=1.5e-30

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1014 amino acids)

>mRNA_8185 K02359 EGH egghead protein (zeste-white 4 protein) (Rhodosporidium toruloides IFO0880)
MTIAEIAPGKEGYGRADSNYGDEKKDPAFVGGGSSYAPLAPGSPALGGPPKSAARDAPAV
VISRTNRLDWIDGLRGLASIIIFTHHFSDLTWAQTHPNTLAVGSLQGFLRNGQLAVGMYF
LVGGRVLAASFLKSAFTVPKAPVVHGDDEPEKPVVPRKPPGPRWLTLSSSLFRRSIRLAF
PAIIVGFIQWKVCVDGLMTKAIEAEERFLSPSALWEPTWCQIGDFAGFLQFCLDLFTNPN
HQYMLTVGSALWTTYDQFWGSVLVYLVAATLTPLPFRGRYSLYLAICVALWWINSSNMLY
MIGLWLADFYASGFVRKIQDHWKWTVGIEVCAMALALAFIAGGEHVAGPADRAMGTITVY
DGKFSWNPSYVWPQYMLMSNWIPPTMILIWVEMSHAMQWFMSWGIFTWVGKVSYGFYLMQ
FLTIYGLMPHILLHFADQDRSSYWNVVTPTYILCLMFNFAVAWASYHLLDRVGLKLGKWI
WDGLFVSKPNTAGSLPAKMGRHAFWCVTKGPIVLARGWAKNVASFGKKMKHGIHMTLHWR
TPTTRPHVPDPTDPEVLAQLHSTRWTSDLSHDKEAMRTRKLLRLQSYMWIPHLFLIPGLT
AIWVVYHPMGAWTYDALTFSSLWRFIWVLSLPNCFFAWLGFITPDISPEPGSLDNKPVCR
EYIRNFFVVLVTKGSNESAVRRGYNKLIRLEKFHPAVKVVVLTDEPYVYPDLQNIVCPKS
YKSPLGKAKYKARALDYFRYHVSLGVYDWILHMDEESVTDAESLRHCLEFIRYTPHHFGQ
GIILYNGTGYWDNWYFTVADGIRVGDDLARFHLQNTIIKRPVFGVHGSFLMTNGELENEC
TWDFGSLAEDFEFSQDAWRRGFTCGRIHGIVREQSPTTLRDFLKQRRRWFMGIRDIKGLY
GLPHLAINLWIVGVFTLGATIINLPLGFIEHSLTPIWIAVSANFNFITFFTLYLWGLFFQ
ELDFGQTWWKIPIHLVCAIIIQPFASIAEGLSAIWAMASEDFGKFEGMSHMASL