Protein Info for mRNA_8213 in Rhodosporidium toruloides IFO0880

Name: 16581
Annotation: KOG1590 Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 118 transmembrane" amino acids 21 to 38 (18 residues), see Phobius details amino acids 47 to 68 (22 residues), see Phobius details PF03650: MPC" amino acids 14 to 113 (100 residues), 116 bits, see alignment E=4.9e-38

Best Hits

Swiss-Prot: 70% identical to MPC1_DROME: Mitochondrial pyruvate carrier 1 (Mpc1) from Drosophila melanogaster

KEGG orthology group: None (inferred from 73% identity to ppl:POSPLDRAFT_87845)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (118 amino acids)

>mRNA_8213 KOG1590 Uncharacterized conserved protein (Rhodosporidium toruloides IFO0880)
MASTFFKWARSPEARNYFMSTHFWGPLANWGLPLAAIADLSSKDPKFISGPMTLALASYS
LVFMRFAWRVQPRNYLLFACHATNATAQSLQGFRFIKYNYMDTDKGAEAVKEAATALK