Protein Info for mRNA_8304 in Rhodosporidium toruloides IFO0880

Name: 16672
Annotation: K01336 E3.4.21.48 cerevisin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 551 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF05922: Inhibitor_I9" amino acids 58 to 155 (98 residues), 37.8 bits, see alignment E=2.6e-13 PF00082: Peptidase_S8" amino acids 199 to 430 (232 residues), 112.8 bits, see alignment E=2e-36

Best Hits

Predicted SEED Role

"Alkaline serine exoprotease A precursor (EC 3.4.21.-)" (EC 3.4.21.-)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.21.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (551 amino acids)

>mRNA_8304 K01336 E3.4.21.48 cerevisin (Rhodosporidium toruloides IFO0880)
MFVPHALAAALCTALAAHALPAASSSDLAPLLTPTLLAIPHEQHEHTTPTLAHIVEDSYI
VVLDDSLTDHDIHQHHAHVDAVHSHTEHALAQASSAHNRRHGVKHRFHVGGKRHSHARSR
SARKLKGYSGSFDERTVDQIRAMKGVKYVERDSLVWASDIEKGAPWGLARISHRNTLSLG
NFNRYEYDSQAGEGVDAYVIDTGVNIDHVELEGRAKWGKTIPNDPDQDLNGHGSHVAGTI
ASAKYGVAKKANIVAVKVLGAGGSGTMSDVVAGVAWAADSAAEQANLKAQGKNKKHKGSV
ANMSLGGGKSQALDDAVNAAVEDGLHFAVAAGNDNRDACSYSPAAAEGAITVGASTISDE
RAYFSNHGKCVDIFAPGLNILSIWNSGNRSVNTISGTSMASPHIAGLAAYMLGSDWAASA
ALDEALSSSSSQGSFASSLNQFAFGGLKGKPEDHLLSPKALKKAMLKVATKGALHDLNPG
SPNLLSFNNYTAPSSTPPKRGKWRTDSSVESSLVEAYLEDLKDELDALKSELKDEIEEVS
GLVRELVEEAF