Protein Info for mRNA_8337 in Rhodosporidium toruloides IFO0880

Name: 16705
Annotation: K01267 DNPEP aspartyl aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 494 PF02127: Peptidase_M18" amino acids 17 to 480 (464 residues), 485.3 bits, see alignment E=1.7e-149 PF05343: Peptidase_M42" amino acids 351 to 475 (125 residues), 22.4 bits, see alignment E=5.9e-09

Best Hits

KEGG orthology group: K01267, aspartyl aminopeptidase [EC: 3.4.11.21] (inferred from 45% identity to cgr:CAGL0I01298g)

Predicted SEED Role

"Aspartyl aminopeptidase"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.4.11.21

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (494 amino acids)

>mRNA_8337 K01267 DNPEP aspartyl aminopeptidase (Rhodosporidium toruloides IFO0880)
MSTPASALQPAQAFVDFVNKAVTPFHAVHECVQRLEKAGFTRLHERESWAGKLSPGGKHF
VTRNQSSIIAFTIPPAEATKTGKPLGISVVGAHTDSPRFVVKPVSKREKAGYAQIGVETY
GGGLWATWMDRDLGVAGRVTLAGAAGKAQQEYSSHLVHVRNPIMRMPTIAIHLERTQNDK
FHYNPETQQVPIVALASKELNRAFVEENNSSAEVSFADPLDISSHHHPILLHTLARELSE
QIGEQITPAQIHDFELSLFDCQPATIGGALNEFIFAPRVDNLFSSFAAVEALVLSTSSSA
PSDGRVSMIALFDNEEVGSVSAYGAESNFIESVFERVSVAFKAEGESEAEAYQRTMASSY
LLSTDVGHSVHPGFTDKHEENHKPLINSGIAIKTNSKQRYATTSQTVFPLRRVAAEAQVP
LQEYLVRNDMACGSTIGPLVSKIGLRTVDIGAPILSMHSIREMAGVKDVKYLIDLFEKFF
ERFGVLDTLAETVD