Protein Info for mRNA_8402 in Rhodosporidium toruloides IFO0880

Name: 16770
Annotation: K07579 K07579 putative methylase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 222 PF05175: MTS" amino acids 44 to 150 (107 residues), 39.2 bits, see alignment E=1.6e-13 PF03602: Cons_hypoth95" amino acids 46 to 171 (126 residues), 29.3 bits, see alignment E=2e-10 PF13847: Methyltransf_31" amino acids 49 to 148 (100 residues), 31.7 bits, see alignment E=3.9e-11 PF06325: PrmA" amino acids 49 to 105 (57 residues), 53 bits, see alignment E=1.1e-17 PF13649: Methyltransf_25" amino acids 52 to 109 (58 residues), 30.6 bits, see alignment E=1.4e-10

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (222 amino acids)

>mRNA_8402 K07579 K07579 putative methylase (Rhodosporidium toruloides IFO0880)
MKLKELEAELQPLRGFEAPKREFEQYVTSAHLASRMIYTAATSFDDIDEKEILDLGCGCA
ILSIASVMMGADSVTSVDIDPDALSIARENVASVEMEEHIDFVHAEIAPAGSKPTSEDVP
VFDPKALGKKFDTVVMNPPFGSWKKGIDMVFLETACQLAEHAVYSLNKTSTRDFIQRKAK
AFGFEGTVIAEMRYDLPKTMAFHKQKSVDIEVDMWRFERIQK