Protein Info for mRNA_8410 in Rhodosporidium toruloides IFO0880

Name: 16778
Annotation: K12761 SNF1 carbon catabolite-derepressing protein kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 862 PF00069: Pkinase" amino acids 32 to 283 (252 residues), 254.7 bits, see alignment E=2e-79 PF07714: Pkinase_Tyr" amino acids 34 to 279 (246 residues), 130.8 bits, see alignment E=1.2e-41 PF14531: Kinase-like" amino acids 127 to 271 (145 residues), 34.6 bits, see alignment E=2.7e-12 PF16579: AdenylateSensor" amino acids 567 to 600 (34 residues), 38.6 bits, see alignment (E = 2.7e-13)

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (862 amino acids)

>mRNA_8410 K12761 SNF1 carbon catabolite-derepressing protein kinase (Rhodosporidium toruloides IFO0880)
MPPKEHHRAPLPTPGQPQQQPQPKKPTVIGEYEIISTLGTGSFGKVKLARHVKTGLKVAM
KFISKRKISTAEMSNRVHREIQYLSLLRHPHIIKLYDVISSPSDIVMVIEYLSGELFDYI
VRRGKMPEDEARRFFQQIMSALEYCHSHNIVHRDLKPENLLLDENLNVKIADFGLSNIMR
DGDFLKTSCGSPNYAAPEVISGKLYAGPEIDIWSCGVILYVMLCGRLPFDDDHIPMLFKK
INGGIFTLPPFLSSEARSLLSRMLTVDSNKRIKLHEIRQLPWFQKDLPAYLFPPLSQLAR
GDGASDAGAEGKHQYEHVEHSFGRQGPGSEAGGSSVGDEGSEPKTPTGNEPGAMGPLTPV
PQPGSTPAGDHQRRREWVEGLGVVDQEIVDDLCGKIPELTSEEVWTKLKEGGDRELRIAY
QLCRDNKRMVEGSHYDDAEAIQTFYSPPGDPRARQPTLHRKKTATDSNTPGDSPRNTSTD
LREAAQPTTIRVLESSLRRPLDDPELAALTAGPGRPLLHRFNSPLRNVAQPLTPTASAGA
QNSTSPSNAPPPPEKPAQTTTKRLRQRWHFGIRSRSEPMEVMLEIYRTLKALKMEWRVRK
GDEEKENEEGGNGKEGGKEGKEGRERERSGGEESEKRRRRREEEERVKKAHELYFVETRC
RMDDVMVRMDLQLYRIDDQNYLVDFRNLGYRPIRSPSAAHSATFPASSAASSASAPRTGS
REVSPTTSTLTSPYLPTGTIELPPQHSSAALNAVATAAAAGTSTPLSSSLPPNTADELRA
RHPELLGNRKAGELSTTPNSAAATAIAAAMGGVKPKRRTAAEVSSPYLFLECAVRLIVEL
ASPAGSSSNAQEGQAQQQSGQS