Protein Info for mRNA_8455 in Rhodosporidium toruloides IFO0880

Name: 16823
Annotation: K06013 STE24 STE24 endopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 491 transmembrane" amino acids 17 to 36 (20 residues), see Phobius details amino acids 85 to 111 (27 residues), see Phobius details amino acids 139 to 158 (20 residues), see Phobius details amino acids 189 to 209 (21 residues), see Phobius details amino acids 216 to 241 (26 residues), see Phobius details amino acids 333 to 355 (23 residues), see Phobius details amino acids 393 to 414 (22 residues), see Phobius details PF16491: Peptidase_M48_N" amino acids 53 to 248 (196 residues), 163.6 bits, see alignment E=4.9e-52 PF01435: Peptidase_M48" amino acids 263 to 480 (218 residues), 111.3 bits, see alignment E=5.4e-36

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (491 amino acids)

>mRNA_8455 K06013 STE24 STE24 endopeptidase (Rhodosporidium toruloides IFO0880)
MSSLLYTLRDKLADPAIPWRSVILAVVVSVELWESWVAGRQRPYLSPVLHPRIPSVLAPY
LPSDSQETYQKSQAYARDKLNFASVLSFVDVLETLILLGGIAAPVLAYLGFSAGGSGWSL
LKGLWDVSERLPFAKCGEIWHSCAFLVLTTVISTVLSVPKEYYRNFVLEEKHGFNKMTRS
TFVKDQVKGLAVSLVITTPLVAGIIKIIHWAGQDAILRIVTWAIVFIFVFQIFMLVVYPY
AIMPLFNKFTPLPTDSPFYAPTKELADKLSFPLSKIWVIDGSIRSSHSNAFFMGVPGLPK
HIVLYDTLLERSSPAEVEAILAHELGHWKGMHIVYLLFTSLVQVAFSLATFTLFLTNRPL
LSAFGFHSYTPSYSTEALPEKFTHLLPPSSGPTIIALMLASMLFSPLSSVLKFVSNFISR
QLEYDADAFAAKLGDSYAKNLKKGLVSIHEKNLSLYDVDPLYSAYNYTHPTLVERLGALD
AKLGDKAGKAE