Protein Info for mRNA_132 in Rhodosporidium toruloides IFO0880
Name: 8500
Annotation: K16944 SEPT7, CDC3 septin 7
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 60% identical to CDC3_CANAX: Cell division control protein 3 (CDC3) from Candida albicans
KEGG orthology group: None (inferred from 78% identity to scm:SCHCODRAFT_72989)Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (422 amino acids)
>mRNA_132 K16944 SEPT7, CDC3 septin 7 (Rhodosporidium toruloides IFO0880) MSHDAHQGQLDGAAPAQNVIQKKLGGFVGFANLPNQYHRRSVRKGFHFTAMVVGESGLGK STLINTLFNTSLYAKKNVPAPHHERPQTVAIESITADIEENGVRLRLTVVDTPGYGDFIN NEDGWKPILDNIEARFDAYLEQENRVNRQKMVDNRVHACLYFIEPTGHSLKPVDIEFMRR LHTRVNLIPVIAKADTLTDDEVVQFKARILSDLAHHRIEIYQAPQYELEDEETLAENEEI VRKIPFAVVGSDTVVATPDGRQARGRAYPWGTIEVDNEDHCDFVKLRQMLIRTHMEELKE HTNGALYENYRTEKLLAMGVAQDHSVFKEVNPAAKMAEERALHEAKLAKMEAEMKMVFQQ KVNEKEAKLKQSEEELYARHREMKEALEKQRIDLEEKKRRLEQGRPLTPEKQQTKKKGFL RA