Protein Info for mRNA_226 in Rhodosporidium toruloides IFO0880

Name: 8594
Annotation: KOG2861 Uncharacterized conserved protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 447 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details transmembrane" amino acids 409 to 426 (18 residues), see Phobius details PF02582: DUF155" amino acids 174 to 384 (211 residues), 145.2 bits, see alignment E=1.2e-46

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (447 amino acids)

>mRNA_226 KOG2861 Uncharacterized conserved protein (Rhodosporidium toruloides IFO0880)
MAARRGLGLLGLFAQTRTTAHTVPQRLAPSLLAHSSSSSARLTSPTSTTPPRPQSPAGLQ
RPQKHKAKKSKSGKEQPWRKTRQSFDAPLLPVGLRTRSTGWERPADGKVIALTTAESYNT
TELLRTLQDQGLLEGAVNLLGEAILLPRWSPASATFFDPDNLLGDPAQQESGEVYIFESG
TIVLWGLSMQAAETFLRKVIRGGSQKFGFVEIGRYGEPETEVLEYWVGNGSTRMAGDSII
LSSAPSAAAPTSDSSFPSLQTLISTQPDASHPIPPSKELLERLAFSAGMARVTKLGVYEE
QFDAFAEGVARIPKLLETGSEAPVKKTDIIKRFGTLHSFRQKLNLEDENLLDEPEFLWED
GDLHGHYTAVCKALEFENRLRTLNDRVDYAFSLQTTLMELLNARVSHRLEWIIIILIAFE
ISLVLYREGLPFLNSDSEEESSHSASV