Protein Info for mRNA_288 in Rhodosporidium toruloides IFO0880

Name: 8656
Annotation: K00521 E1.16.1.7 ferric-chelate reductase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 676 transmembrane" amino acids 26 to 46 (21 residues), see Phobius details amino acids 94 to 121 (28 residues), see Phobius details amino acids 141 to 163 (23 residues), see Phobius details amino acids 175 to 193 (19 residues), see Phobius details amino acids 207 to 226 (20 residues), see Phobius details amino acids 236 to 255 (20 residues), see Phobius details amino acids 262 to 285 (24 residues), see Phobius details amino acids 419 to 439 (21 residues), see Phobius details PF01794: Ferric_reduct" amino acids 136 to 250 (115 residues), 54.3 bits, see alignment E=2.3e-18 PF08022: FAD_binding_8" amino acids 297 to 409 (113 residues), 43.3 bits, see alignment E=5.4e-15 PF08030: NAD_binding_6" amino acids 416 to 650 (235 residues), 76.8 bits, see alignment E=3.3e-25

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (676 amino acids)

>mRNA_288 K00521 E1.16.1.7 ferric-chelate reductase (Rhodosporidium toruloides IFO0880)
MRATHAPTYTDEQHAYLDWHNSHVQAFFYAGLFFYVLLLGLANFLSRLISAAFVRRFHTL
NPSPVDQKGLATLVQLFSACVASWRKWTYRRSQLVVWVGLGNAAQLFVLLGYLALTLSIA
FSGAYGHPDYQAHHCARLAYAHVPILVGLASREAGVLAWLTGFSPATLINMHRWMARNVF
FLVCFHIGGRIYTNVPTINPLLPHMRYQAWGIAGFIFWSIMVFGSIRPVRRRFFKSFIFT
HIAAFALSVICLSFHRPQVAPYLAATAAVYILDRIVRFASLVYFNLFRAVAPGQGPSATV
EIVGTDVIKVQVSTGLAWKPGKHVYLHAPLLEAGGHPFSIASSYLPVSHRESDPKPQAGE
LTLVIRVHGGLTAKLYQHALRGQENEADGENGSTPVPMWPVFLEGPYGHDLLLHRYESVL
LMTGGTGVTFALSCLLDLVRRARNRHLGGVKPLVTTRVTFVWSVRNSGDVDCIAQELREA
IHHAPPGFLDVQVYITSAGRRLEAVDTTASSSSGSSASMLKRVPTSATLHSVEKEVLHNS
NRSTETLIPRYDQPYAITFSRSTLDDLGNTPPPAPTSTESLDQVPLLSHTPPTSTTSTSL
DSVVIPLHTGRPRIRDILADVVSQTPRAGSVAVGTCGPVALTDEVGAACSDMIDPGKVSR
GEHRLNIMLHSEVFGW