Protein Info for mRNA_330 in Rhodosporidium toruloides IFO0880

Name: 8698
Annotation: KOG2018 Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 425 transmembrane" amino acids 54 to 72 (19 residues), see Phobius details amino acids 270 to 290 (21 residues), see Phobius details PF00899: ThiF" amino acids 36 to 319 (284 residues), 127.7 bits, see alignment E=2.6e-41

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (425 amino acids)

>mRNA_330 KOG2018 Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis (Rhodosporidium toruloides IFO0880)
MAGVSQKAAWQATETVRVGGKGKKKTSEVIIREALARNYVFLGEDKMDQVRKKFVVVVGL
GGVGSAAAVMLVRSGIRKIRIIDFDQVSLSSLNRHSTATLAQVGTPKVTSCAEYFAQIAP
WVEVDARIELFEKDRAAELLEGESRSLQAKGRRGCNPDYVIDCIDNIDSKVDLLAYCRKN
NLRVFSSLGAAAKSDPSRIQIADISTTFEDPLAKSVRRRLRLEGVASGVPVVYSTEKPRP
DLGLLPLPEEEFQKGKVDELHAMSNFRVRILPVLGPLPAMFGNVAAAYVLQDLAGFRQEP
LPVKTRPKLNATLHRQLSAVQQKMTGDNRLPITEDDCGYIFEELHRAKSVAPPHAFPSRP
TLLPWKKSRGLAWDNLVVFDREEGYKHEEHCLLGDEEPEEYWGREVAELVERRMAEERRL
RHYRM