Protein Info for mRNA_376 in Rhodosporidium toruloides IFO0880

Name: 8744
Annotation: K00381 cysI sulfite reductase (NADPH) hemoprotein beta-component

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1393 signal peptide" amino acids 1 to 17 (17 residues), see Phobius details PF00258: Flavodoxin_1" amino acids 646 to 788 (143 residues), 85.7 bits, see alignment E=5.6e-28 TIGR02041: sulfite reductase (NADPH) hemoprotein, beta-component" amino acids 814 to 1357 (544 residues), 794.8 bits, see alignment E=1.9e-243 PF03460: NIR_SIR_ferr" amino acids 874 to 933 (60 residues), 61 bits, see alignment (E = 1.2e-20) amino acids 1150 to 1216 (67 residues), 45.9 bits, see alignment 6.2e-16 PF01077: NIR_SIR" amino acids 972 to 1128 (157 residues), 162.4 bits, see alignment E=9.8e-52 amino acids 1273 to 1356 (84 residues), 11.7 bits, see alignment 2.3e-05

Best Hits

Predicted SEED Role

"Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)" in subsystem Cysteine Biosynthesis (EC 1.8.1.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.8.1.2

Use Curated BLAST to search for 1.8.1.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1393 amino acids)

>mRNA_376 K00381 cysI sulfite reductase (NADPH) hemoprotein beta-component (Rhodosporidium toruloides IFO0880)
MAAIYSSVYATAQLAGATVVPSPVLAPSQLAQHPSSLPTLVVCSPEQLIQLLPQLRTLAR
SHVVIQVSTHRTRDLAPALALRGSGLALVYSAGDDQARTNAVVAARVAAQGHGVVHFGEF
DPDTVDFGFAQDDAAFVRGDGAGKAQNGEQAANGNGNGNGASHDEASAVARLFSSAFAHK
HASSQAYSGASSPKTLVVALGNTKALESALPSDYALVSLSLSRPLTPSQLRSLVPPSTEK
VVVLEQVYKKAGKWSPLFLDVVGAFAEADEDEKVPSILSGSLGEVSDAAAAVKQIQDAVV
AGSNPFTVGTIPSASPAPAQKTARPPKHESTYTKLLDEVFNERLWLANSPESLLPSSSNV
SPTSPEYALGHVLGANKEREALRQQVREVLASSKVDEAAAKALQAWLEDDRNPKKVKALA
SVTLPESLKQADFSPKSNWIIGSEAWSHDLGASGLHHALSTGADVNLLMIDTTPYHLPTD
QPLAQRRKDAGLYAMTYGNAYVASVAVYGDFAQTLRAISEADAYKGPSIVLAYLPGGEHD
STPALELLKQTKKAIEVGSWPLYRWDPSAEQRGRDVFQLDSEKIKADLRTFLDRQNHLTE
LSARLPSFGEALESTSGSKLVEAQKKKARQAFDALSGALEGPPLLVLYASDGGNCEKLAK
KFATRARTRGVAARTLAFDDMPIEDLPLETNVAFFTSVAGQGEFPQNGREFWKAVQAGKL
GDMSKVNTSVFGMGDSHYWPRKEDAHYYNKASKDLHKALEEHNAKMFVPLGLGDDQDPDG
PQTAYKIWEPQMWKALGVDSFESTEPELEPITNEHIKIASNYLRGTIAEGLADKSTGALS
ESDGQLTKFHGIYQQDDRDIRDERKAEGLEPAYSFMVRLRLPAGVCKPDQWLAIDEIADK
RGNQTFKLTTRQTFQFHGIVKHNLKPAMQEINKCMLDTIAACGDVNRTVMCSANPSLGKL
HQQVFHFAKELSDGLKPQTSAYAEIWLDEKQIAGEAVKDVEPLYGEYYLPRKFKIAIAVP
PYNDVDVFCHDLGYIAILDENKKLLGFNVTIGGGMGVTHSMKSTYPRLADVVGFCTPDQG
LEVAKAVLTTQRDNGNRANRKNARVKYTVDRMGIDNFVAEVEKRLGYKLQPARPYEFTSN
VDHFGWQTGEDGRRHFTAFIENGRVQDEPGKPYKTAMREIAKVHKGVFRLTANQHLIIAD
IPPEEEATIQALLEKYNLDKVDFTGLRLSSAACVALPTCGLAMAESERYLPVLIDKVEGI
MEEAGLRNDSITMRMTGCPNGCARPWAAEIAFVGKAPGSYLMMLGGGYYGQRLNKIYREA
VSEEDILAILRPMIKSYALERLDGEHFGDFVIRKGIISATTEGKAFCASSRRLLTPACVA
NLAPSADDNMCPQ