Protein Info for mRNA_622 in Rhodosporidium toruloides IFO0880

Name: 8990
Annotation: K18156 ATP23, XRCC6BP1 mitochondrial inner membrane protease ATP23

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 258 PF09768: Peptidase_M76" amino acids 70 to 255 (186 residues), 212.7 bits, see alignment E=1.6e-67

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Protein Sequence (258 amino acids)

>mRNA_622 K18156 ATP23, XRCC6BP1 mitochondrial inner membrane protease ATP23 (Rhodosporidium toruloides IFO0880)
MMQAPAFTEDDSPSFRRSFERWRATLSSFSPASSLRCDTQTAWAEGTGLPEMTNEGKTQA
ELEQEAKDCKRCQKWRDELTRDSPIVRFLLTHISLLPPPPDAPLAPLEGSQTPHLPLPIT
CSPCPPTMAGGYASGLGVLLCQNRFMSRKHMEDALSHELIHAWDERRFKPKRRWGEDLRA
HACTEIRAENLSGDCRLGREFTRRNWAFTKQHQACVRRRAILSVAANPNCKSREEAERVV
NEVFDSCFPDTRPFDEIY