Protein Info for mRNA_626 in Rhodosporidium toruloides IFO0880

Name: 8994
Annotation: K19423 epsE glycosyltransferase EpsE

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 853 transmembrane" amino acids 37 to 56 (20 residues), see Phobius details PF00535: Glycos_transf_2" amino acids 153 to 285 (133 residues), 43 bits, see alignment E=9e-15 PF13439: Glyco_transf_4" amino acids 431 to 593 (163 residues), 36.5 bits, see alignment E=1e-12 PF00534: Glycos_transf_1" amino acids 616 to 788 (173 residues), 89.1 bits, see alignment E=5e-29 PF13692: Glyco_trans_1_4" amino acids 619 to 773 (155 residues), 77.9 bits, see alignment E=2e-25

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (853 amino acids)

>mRNA_626 K19423 epsE glycosyltransferase EpsE (Rhodosporidium toruloides IFO0880)
MLGLLGKSRDNPKLRSPDLRRPHVSTRNRGGGRRQRLPLFLLLATTAFVLVLWHNLSEPS
APAPTSARSRAVPTTSERLREKLSLRGRTRRKGGSSLIPSAQAPFVLPDHLLPVHHDASL
MIYSNSPVAPTRPPLNQFLLDPRADLSSPVVAIITATNNPRPVLVDTATTLFGQSLQNFV
WVIVNDHTDEPAALEVLEQVAKDPRVVVIQNRGAKGLAAGRNVGLEYVFRQYSPPPKYLV
SLDDDDLFEYTALEKACWMLESNPDWDLGGFRYVKWGASNETVLTGVHSNSDNFLVGNFV
PNAAVYTSRAVLGSGCRYDEVEFQDGGEDWDFWMCLAEHGYWGGSLLEPLYWYRVNSPKF
RSQRWGKTFVDGFGALKRHIQTKHARLEGKFPSKKPARNVPLAPVSWNPPFEQALAHTDK
QILFVIPWLWMGGADIGALHMIQLYAAAGYRVTVACTLNQHPESVELRPYVLQYTHDVHI
LPSFLHVHDFPRYIKHLVRSRGIRQALVSHSQLLYELLPALVEQMPDVEWIDYLHNESYD
NWKSAGYPRYSIISQRYLARTITCSYHLKNWLLDNGHLDPDRIGVVKLGIETSKFVPATP
AQRSAAKADLLQVEPETLVITVVGRLDPQKRPLLVPRIAEQLLKRIDHDFVIIMIGNGEH
REQLLEMIEMLDMQEYVRILGTRSDPSRYYAASDIFLLPSVSEGISIAINEAMAMGLPVV
TARAGALPEQLGELDAHGRQVHGPSELGGILVDHELDEINDPVAYAAALESLIVDSALRA
RLGRNARKLVETGSDWRTTLAGLFDELKLASNLPNFGAGDLRYPHPSAYYATEVLLAESY
KLVDMGSQYPAHR