Protein Info for mRNA_701 in Rhodosporidium toruloides IFO0880

Name: 9069
Annotation: K08776 NPEPPS puromycin-sensitive aminopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 938 PF17900: Peptidase_M1_N" amino acids 19 to 191 (173 residues), 113.6 bits, see alignment E=2e-36 PF01433: Peptidase_M1" amino acids 297 to 514 (218 residues), 232.1 bits, see alignment E=8.8e-73 PF11838: ERAP1_C" amino acids 595 to 914 (320 residues), 260.7 bits, see alignment E=3.6e-81

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (938 amino acids)

>mRNA_701 K08776 NPEPPS puromycin-sensitive aminopeptidase (Rhodosporidium toruloides IFO0880)
MAAPAQAQNDARLGTDVTPIHYDLTIRTDLKSLTFTGTAEILIEVHKPVQSIILHAASPL
ELESAVLGSAQLKTESVRPAEHIRVDEKKERAEIKFAGGEIQKGEHKIGLRWKAQLDDSM
LGYYKSSYPKKDGKGKAFYGLTQFEPCQARRAFPSFDEPAMKATYTISMISRVGTVSLAN
TDVESTSHLGAGGAFPRSDLLNDKFFEGETDKEVVGKTVKTEGQTKAAVEAQDEGDFKDD
WEIVKFTKTPKVSSYLVAWANGHFEHIESSFTSPLSGRTIPLRLYATWDHIKQGQLALDT
TAKILPIYEKIFDIEYPLPKLDTLVASDFDAGAMENWGLITGRTSLYLWDPKQSGLQAKK
GIVSTQSHEVAHQWFGNVVTMEWWDNLWLNESFATLMGEVIIPDRIEPTWKVHSNFITDH
LARALSLDALRSSHPIEMPCPNEETIQQIFDALTYSKGASCLKMLSNFVGEEKFLKGVSI
YLKKHLYGNARTEDLMAGISEASGVDALTLMKNWLSKTGFPLISVEETEKGLKVKQNRFL
ATADATPEEDETIWQVPLQILVVDSKTGEKKVHSDVVLTQREQEIELPNVANTTYKLNAE
TCGVYRTLYPVSRLAKLGDEAGKASTSAFSLNDRMGLVQDAAVLASSGYAKTSGALTLIK
GIKGEEENLVWQEISGALGNLSSTWWEQPQEVRDAISKFRRELFKPVADRLGFEYSDSDS
VDTVELRTMAISTAAVTGDEATLAEYKRRFGQFIEKNDDSLIPGDLKTSIYTQCVRFGGE
KEYEKVLEVYRNPPTPAHRSSAIAALCSSEKDELIQRSIDFILSGEVKNQDIASFVAHLA
RNRLAKRKVWGWFKSHYDEIMERFKGNFSIGRIVQLTFSSLSTEEDAKAVEEFFKEKQTS
VYDQFLSQGLDSVRAKAKWLERDSKDVEQWLKENQYLA