Protein Info for mRNA_734 in Rhodosporidium toruloides IFO0880

Name: 9102
Annotation: K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 542 transmembrane" amino acids 46 to 63 (18 residues), see Phobius details amino acids 90 to 110 (21 residues), see Phobius details amino acids 117 to 138 (22 residues), see Phobius details amino acids 144 to 164 (21 residues), see Phobius details amino acids 176 to 195 (20 residues), see Phobius details amino acids 205 to 226 (22 residues), see Phobius details amino acids 295 to 314 (20 residues), see Phobius details amino acids 333 to 353 (21 residues), see Phobius details amino acids 364 to 385 (22 residues), see Phobius details amino acids 405 to 428 (24 residues), see Phobius details amino acids 440 to 464 (25 residues), see Phobius details amino acids 472 to 491 (20 residues), see Phobius details TIGR00879: MFS transporter, sugar porter (SP) family" amino acids 44 to 502 (459 residues), 347.4 bits, see alignment E=6.6e-108 PF00083: Sugar_tr" amino acids 51 to 506 (456 residues), 325.8 bits, see alignment E=4.8e-101 PF07690: MFS_1" amino acids 56 to 339 (284 residues), 88.8 bits, see alignment E=3.7e-29

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (542 amino acids)

>mRNA_734 K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12 (Rhodosporidium toruloides IFO0880)
MPSILASKDDPKPNGDPQYIETVVPGLLGVQDDLIVADGEDEIHPFVWLLSLVAGISGFL
YGWDTAVVGGALGNIGDALGHTLDSVEQEWAVASLSAGAILGTLIGGTFSDKIGRKAVLV
IGDVLFTVGGILICASYSLEQFIVGRILMGGGAGIAAVVCAVYLGEVAPANFRGRIVAVQ
SVMITGGQLAAYAVSAGLNNVHNGWRILFALSLPFAIGQGIGMHWLPETPRFAVLSGKTS
DAEATLARIYPKATPEQLQLKLKAIALATEVSTLLKKKHPSLVGRIYAVCSTPRYLRCTV
CAAVVFLGQQLSGWNSFLYYSNKLFGAAGFHNTSAIGILVAGINVIFTIVSMFSMDRVGR
RRMFLLGVPLMTIALAIAAIAFHFMTLGTGNKLLDNVDYPQKWVGLMLGMMCLFIVGYAP
SLGTIAYTTIELIPLEVRGIGSAIAVAFQWGGNLIISATFLSLLSALGPAGTYGFFSGLC
FLTFVFIFFCYPESAGLTLEETGTLFVDGFGVRKADRMRQAKRQTTGRDLEAEGSVAADS
KF