Protein Info for mRNA_763 in Rhodosporidium toruloides IFO0880

Name: 9131
Annotation: KOG4686 Predicted sugar transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 506 signal peptide" amino acids 1 to 16 (16 residues), see Phobius details transmembrane" amino acids 31 to 53 (23 residues), see Phobius details amino acids 59 to 81 (23 residues), see Phobius details amino acids 92 to 112 (21 residues), see Phobius details amino acids 128 to 148 (21 residues), see Phobius details amino acids 160 to 182 (23 residues), see Phobius details amino acids 208 to 231 (24 residues), see Phobius details amino acids 252 to 273 (22 residues), see Phobius details amino acids 284 to 305 (22 residues), see Phobius details amino acids 311 to 330 (20 residues), see Phobius details amino acids 351 to 368 (18 residues), see Phobius details amino acids 384 to 405 (22 residues), see Phobius details amino acids 485 to 505 (21 residues), see Phobius details PF07690: MFS_1" amino acids 3 to 356 (354 residues), 42.2 bits, see alignment E=2.7e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (506 amino acids)

>mRNA_763 KOG4686 Predicted sugar transporter (Rhodosporidium toruloides IFO0880)
MLACACLLSVGSHYSSYVLGPIKRSLGTSESGFAALISSFELLNTISPLVSGFLVPKYGA
AVCGLFATGAVLLGQLIVCFAEGRDGGAAGNIPGMVFGLLIFGAGTSPLAVVQETIILQN
NSASSRFVARSVAAGLVLGKTGSFAAGFTSERLYSISPRLPFLTASSLALFSFSACVMYA
VLERSTPTHAPSSIKADLHSHHRSLRLSALAGFGIPFWYYIAVCALAGTWYTTQHLSSHI
LQAVYGISESQASATASLILATPIFLYPLIGYAVDKRPHLLERIWLAVPCLTASSYLTLL
LLAPVVPPSLALLPAALGIGCGPLLLVLVVPRIVKRHQAPTALGAHKSLEMSGAIIFQTF
AGALLSLGHRRGDVPEDEQDEDASGALTLLAVGALVQVAVVAKWWHSIRQRTAETAAGEG
AVTAARLSLEGVVSDLEDIGDEARRGLLSDASPVSRAHFDGLDADGETEEMSWKKARDLA
WGRRALFLAGGTVVFSWLCFVGNLLM