Protein Info for mRNA_769 in Rhodosporidium toruloides IFO0880

Name: 9137
Annotation: K08141 MAL MFS transporter, SP family, general alpha glucoside-H+ symporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 555 transmembrane" amino acids 54 to 81 (28 residues), see Phobius details amino acids 134 to 152 (19 residues), see Phobius details amino acids 164 to 181 (18 residues), see Phobius details amino acids 192 to 211 (20 residues), see Phobius details amino acids 231 to 252 (22 residues), see Phobius details amino acids 313 to 334 (22 residues), see Phobius details amino acids 351 to 368 (18 residues), see Phobius details amino acids 375 to 396 (22 residues), see Phobius details amino acids 406 to 432 (27 residues), see Phobius details amino acids 445 to 467 (23 residues), see Phobius details amino acids 479 to 495 (17 residues), see Phobius details TIGR00879: MFS transporter, sugar porter (SP) family" amino acids 28 to 506 (479 residues), 351.8 bits, see alignment E=2.9e-109 PF00083: Sugar_tr" amino acids 62 to 512 (451 residues), 293.2 bits, see alignment E=3.8e-91 PF07690: MFS_1" amino acids 83 to 417 (335 residues), 57.6 bits, see alignment E=1.1e-19

Best Hits

Swiss-Prot: 43% identical to MAL11_YEAST: General alpha-glucoside permease (MAL11) from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

KEGG orthology group: K08141, MFS transporter, SP family, general alpha glucoside:H+ symporter (inferred from 72% identity to cne:CNF00600)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (555 amino acids)

>mRNA_769 K08141 MAL MFS transporter, SP family, general alpha glucoside-H+ symporter (Rhodosporidium toruloides IFO0880)
MSHATEKVGAEIEVVENVRREIADYDNVVAEARRETEDQQSMTLREGLRRYPKAAAWSIL
LSTAIIMEGYDVVLLGSFYALPQFNKKYGVQLPDGKYTVTAAWQAGLSNGAQVGEIIGLC
INGWASERFGYKKTMLAALASMICFIFIPFFANNVQTLLAGEILQGIPWGVFQTLTTAYA
AEVTPVALRPYLTAYVNLCWVFGQITASGVLRGMLTVDTQWAYRIPFALQWIWPLPILIG
TIFAPESPWWLVRQGRNDDARRQIRRLHTNPTEQEIDNQLSLMVHTNALEKSIAAGTSYL
DCFKGVDLRRTEIAAGAWMVQNLCGSAFMGYSTFFLEQAGLPVERAFDLSIGQYGIGIAG
TLSSWLLMRYLGRRTLYLFGLAFMVCALIVIGGMGSLPSSNTSAQAAIGAMLLIYTAVYD
STVGPVCCDCLVAEISSTRLRAKTVVIARIAYNIIGIVNGIIMPYFLNSTALNWSARTGY
FWAGFCALCLLWTYFRVPEPKGRTYGELDVLFENRVSARKFRTTAADQFAGHGMPQRTPS
SDEKDEKFDVQHVEL