Protein Info for mRNA_816 in Rhodosporidium toruloides IFO0880

Name: 9184
Annotation: KOG0783 Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1501 PF13637: Ank_4" amino acids 99 to 138 (40 residues), 26.7 bits, see alignment (E = 1.3e-09) PF00651: BTB" amino acids 681 to 740 (60 residues), 25.4 bits, see alignment (E = 2.8e-09) amino acids 823 to 934 (112 residues), 33.9 bits, see alignment 6.5e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (1501 amino acids)

>mRNA_816 KOG0783 Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains (Rhodosporidium toruloides IFO0880)
MSLASTTDIHALYASRAIAKARTFIRSALAGGAGGTGGSGASGGGGVLSKSPNMGGWAGG
GGNADKAAIASELNRRDYLGRTVLHLAVTESEPWALDWVELLLGVSGLAVNAQDTESGWS
ALHRALYAGNIAAARLLLARDDVDTRLKDFEGLSPFDVYNSTVDGTNPSPDPLSTNPANP
GRMELFSWGSNRNFVLGFASDSERTIPERVQLRREEGGRGLAAFEPLRVKDISMARLHTA
IVTDEKRNNVRLCGYGTGGRLGPTTQTQFTFAPLRDFPHPVSSVVLSPDHTVVVTTAGDV
YTFGLNRFSQLGYPLDAPTPSPFAKSNHQDDPIQSTPRRVVGALKKEVVLGAAASRTHTA
VFTADSLYTWGTARGQLGYPIAGNSVQVLPRKVTLIQQPVIQLTATENATACLLESRDVV
VLCHEAYVKVTFPLTPFPSKMLVYRPPSLGAKPSIRKIASCGNTFAALSSLGDVFTFSLD
SGSTSAGSSGGDGTSSPGYGSRLTPKTQRLWNVRRSFTSATDLDVGLDGSLIICTVSGHV
FVRSRKFEGSSSLSKSGMDGGKGGGWKFSRIPYLQRVIKVAANSTAGFAAIRADVPLRFI
EIEGPTLARDLLRILPHWARNGGPAALEAMAGQSRPRRAAGEDSDEEDDTDAVIERDIEV
ARRLMEIIRCWDLTWEVPSFGTDAVINVGALTIPVHKAVLSARSPVLAQHFATSRQFDVS
CSPLTAFLLVHYLYSDDFPAVWDTRIGMPLRTSLPDEQKRMLQVGVVRTEFRQLALALEL
SALAQVLERQVKTVPPPTLAASLGDVFSASSTSKGRLPDSLKPDVVLRLADREVKCHSVV
LRARCPFFATFFDDADWSDSRRERGIVSFDFAHIDWTVMSLVLDHIYRDAGMSLFQTIER
ETAEEYIDFTVQVLAAANELLLDKLKQVCSAVLRSFVTLQNVCSILCDAAFYEAHDLARA
CMYFLSSSMETALETSLLDDLPTDLLVALAAFIRERQGAKMPISRSGLLLQEVIAKHQEY
YAETDVARPTGAAKRYRPAVVPNSPRPSPSLLSPTSSPQLAPIASSAKSPRMRPSTSPNP
SPSLPAVREVDEPFTLDEDFMLDSGASIPSRALPVTSPPVQAAIGRRRSSLVPAGSPSQA
SFMPLGSPPPSRLQPWQAPPEKNDKGRLDLRSIMADQSAASELRRPSFAKQPIVPPPSAA
SPALGGLSASAASWRPVSAPRASSLASIQSEQQASAPTVSRIPSTPSLRSPPPLLRNTPP
ASSPSLRSPPPPGSATGPVYTPARMTPTKGTPGSRTPKSHFGGSDTPWQNFDRIAPPAPP
VASSSSAAFDPFAPPSPAASFAAIQSEQIAQLAAVELHRAPRSFADVMAEEQAEARRREQ
ALKEEKEFLAWFEEESRKVQQETGGQPGVAQSGKSGKRGGGGGGRGGKSRGGGGKKSVPP
SQTEAGPSASPSGATTPKRGGASGGGRGGRGGGRGRGKGAGNGPNTPSSAPPPASPAGVA
A