Protein Info for mRNA_921 in Rhodosporidium toruloides IFO0880

Name: 9289
Annotation: KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 455 transmembrane" amino acids 79 to 101 (23 residues), see Phobius details amino acids 146 to 168 (23 residues), see Phobius details amino acids 260 to 278 (19 residues), see Phobius details TIGR01297: cation diffusion facilitator family transporter" amino acids 76 to 173 (98 residues), 93.2 bits, see alignment E=9e-31 PF01545: Cation_efflux" amino acids 80 to 306 (227 residues), 158.4 bits, see alignment E=1e-50

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (455 amino acids)

>mRNA_921 KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily) (Rhodosporidium toruloides IFO0880)
MASAVSSSLRQRNPTSSTSSSRDLHLHSHGSGDHMHSHGHSHGHGHGGHSHGIEETQQLS
SAFASLRNPSQLDPGSRITLVGLVANVGLTALKGVAGYVLASSALLADAAHSGSDLIADV
VTLASYRIGRWEPSARYPYGYGKFESLGSLVVSFLLFATAAGIGLHSYHHLLLSLATIPS
IPPELLASLDFLPHGHVHGPEASHSDTPSTDGIVDARAMYFAAASIVIKEWLYRATLKVA
RQQHSNVLLANAYHHRSDSLGSLVALIAIGAARVGYPMLDPLGGLVVSGMIAKQGWDVGK
EALGGLVDQVTDEKVQPSVYEAIRGLSAHSGSIEAWKDERVKKGGILPSTTSSTSDEILH
PTPSSPSSSSEEPGTLPILSIPSIRLFASGPSLLIDIELVLPSSLSLREANQIERAVGRR
VREVVGEERVREVVVRLKAEEEERAEGEEGGKKEE