Protein Info for mRNA_1044 in Rhodosporidium toruloides IFO0880

Name: 9412
Annotation: K07765 MBTPS2 S2P endopeptidase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 286 signal peptide" amino acids 1 to 18 (18 residues), see Phobius details transmembrane" amino acids 27 to 48 (22 residues), see Phobius details amino acids 77 to 102 (26 residues), see Phobius details amino acids 151 to 172 (22 residues), see Phobius details amino acids 184 to 204 (21 residues), see Phobius details amino acids 228 to 242 (15 residues), see Phobius details

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (286 amino acids)

>mRNA_1044 K07765 MBTPS2 S2P endopeptidase (Rhodosporidium toruloides IFO0880)
MLLAWLVFYTALQIARPRIQPFLSRLSSARLLISLDTVSLSVSTTTLNEAPRRLLDLLSR
IRSTRTRRTSGKRRLSWLYDTGALLSLTGLVVAQVVLLWAAWRAIESAAQVPLPGDHAET
LSPRLLKRAPVSLEEVPVAPSPTQGLIIRPVIPGLTTSLSGLPIFFGSLLVAQSFHELGH
GLAAAAEHIPLLSTGFRLFLLFFPTFHVEVALDADVSPLTDLRVASAGVWHNVLLASVAW
TWSDAGAGLADRIGRTLGLWDMLDEGVIVIAVDSHSPLAPHLAPAC