Protein Info for mRNA_1109 in Rhodosporidium toruloides IFO0880
Name: 9477
Annotation: HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701
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Protein Families and Features
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (251 amino acids)
>mRNA_1109 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701 (Rhodosporidium toruloides IFO0880) MTSPADSQAPRARGKRGPAASSCDACRRRRIACRRRSGDSNGPCESCEKKGFSCAFGGQA SGRLALVKPSTPPLLAGPSRADNRLALEELDSAFGFELLSLYDGVDGRSSALYPLPIWDY SSLRSRFQHAGNRLCELSKEDQVSLQSCRNPGLREGSSVLTLLRSSSAALSSPRQCRTGT RPHWRHRKRVQSSQGSCSRRRRRTPTCSAYGANPTRSAPRACCCSSKSPDAARSPASTLS SACRPASATSR