Protein Info for mRNA_1168 in Rhodosporidium toruloides IFO0880

Name: 9536
Annotation: K01474 hyuB N-methylhydantoinase B

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 584 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF02538: Hydantoinase_B" amino acids 7 to 546 (540 residues), 683.9 bits, see alignment E=6.4e-210

Best Hits

KEGG orthology group: None (inferred from 63% identity to uma:UM00080.1)

Predicted SEED Role

"5-oxoprolinase (EC 3.5.2.9)" in subsystem Glutathione: Biosynthesis and gamma-glutamyl cycle (EC 3.5.2.9)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.5.2.9

Use Curated BLAST to search for 3.5.2.9

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (584 amino acids)

>mRNA_1168 K01474 hyuB N-methylhydantoinase B (Rhodosporidium toruloides IFO0880)
MAIEKPDPILLTLFANRFMSVAEAAGRALQLTSISTNIKERLDFSCALFAPNGDLIANAP
HLPVHLGSMSFAVRYQVATLGVGADSPSGDGIVDGDVLLTNSPIAGGSHLPDLTCIRPVF
DAEKKNIIFFVASRGHHADIGGVSSGSMSPNATTIFEEGANIETFKIVRQGKYDRDGLYQ
RLVKEPASYPGSSGSRCFRDVESDLQAQIAANHRAVTLLYGLIDEYGLETVQRYMGFIRD
NAEFAVRNLLRKAAKRAGKNVLHAIDHMDDGSPIELTITIDEETGSAVFDFEGTGPETWS
SLNAPMAVCSSAVIYCLRIMCDEEIPLNAGCLAPIELRIPKGTILNPSETCAVVGGNVTT
SQRVTDTVLRCFEAVAASQGDCNNFTFGTSNFGYYETIAGGSGAGPSWHGESGIHCHMTN
TRITDVETLERRYPCLLHEFSIREGSGGKGKFKGGDGVVRDVEFTIPIEASILSERRVNQ
PYGLKGGQPGERGKNLWIKQRRKEDGDWKADDSSPRVINLGPRSTIKMGAGDRFVIHTPG
AGAWGDENWQDENVAPSASKAASKPTLVGLVGSLAERAAAQLGV