Protein Info for mRNA_1278 in Rhodosporidium toruloides IFO0880

Name: 9646
Annotation: KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 710 PF00170: bZIP_1" amino acids 454 to 514 (61 residues), 32.8 bits, see alignment 3e-12

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

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Find the best match in UniProt

Protein Sequence (710 amino acids)

>mRNA_1278 KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors (Rhodosporidium toruloides IFO0880)
MAQPHVLSPLPVHLHDSSLVSALGGQLSPSPWSRFLSPSLFSQRSTPVPQLAAAPSPLKE
STVAVPQPNGGCGLFTHAREINPFEKSFAVVDPEAVAGAVGRAGLGAQGGQAGGEMALQL
PQGRPKRKRALSSPAVFTPGGSKAGAGQAGEAFMKQAKRPDLRLVAKDSGIGMLDESSPA
AAAPSAYSLRSSSNSFDSTTGSSLLRHRRGQSLTNSPETSIAPSPLSDKLATTAFVPADS
TFTHFQPQPVPFSMPAAQPPAAYPDPSLYAPTSLAPSSLGGPEVVAPLPFTAPGAPFDPM
QVQMNPVAPFAAYEQTHMQFVAPGIDAAYPFANPLVNPPHTHHLASAPLAPILHGHYIPP
THPALAQPSIPLGASVMSSAAPVPSAAPTKTSGKKKSSAANVAHSATSASPPTATSASPV
PVPAPSKPPGKKRGRKPKNWDPTLERTVELDPEERERQRKLALERNRIAASKSRRRKKER
VELLETASSDLCNRNLALQAECRALLSEVHSLRSFLSQSHPEGLCTCQHINGYLARERDG
GGIPAILYGAGETLERDYARPPKWGAEDDAFAGKAMEVWEASGGAGVGGGAAQGKKKAGK
AGSAASPTAAAATGAQEVHDTAGVLDMLAPVVGPAQGSIPLKAPTSGAGSGSPKKQAPAA
ARRTSSRRAAAAHESEDEDSDEEEDESEEEEAIELKSRRARAIAVRNKSG