Protein Info for mRNA_1317 in Rhodosporidium toruloides IFO0880

Name: 9685
Annotation: K10586 BIRC6, BRUCE baculoviral IAP repeat-containing protein 6 (apollon)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 502 PF00179: UQ_con" amino acids 225 to 358 (134 residues), 84.9 bits, see alignment E=4.3e-28 PF05743: UEV" amino acids 273 to 323 (51 residues), 22 bits, see alignment 1.3e-08

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (502 amino acids)

>mRNA_1317 K10586 BIRC6, BRUCE baculoviral IAP repeat-containing protein 6 (apollon) (Rhodosporidium toruloides IFO0880)
MLDVLGTIGGSEGLLGVLFGERREKRWSEGIGGWMRGEGEIRWERKVAPGQVEEVGKGKK
GKAKAAPRGRKRKAEEGEEEEANKGEVVMTAPLYTHLGKLLRQASAFRKAAISGDFDDSD
AALIGICGDFVTAGERFKQTEKVWEDMHGRDQAVNGADGEAKGKGKGKEREWTEADYVKA
CEALAYDSVNLAIENDKGEVTYPNHYYNRDILASANSRRTNFAHLAKELAVLSTSLPPGI
WVRVDETRVDVIKCLIAGPEHSPYANGLFEFDIFLPLQYPLVSPVCWLKTTGGNKVRFNP
NLYAEGKVCLSLLGTWSGAPEEMWQPGQSTILQVLLSISSMILGTNYPFYNEPGMGAMKD
DERNKNYNKNCSLATTRWAILDWVKDGKFKESIWSDIIVSHFLLQRSKVVSTIKAWATKD
PRMRAWKPGFDSCAGATHLQPYNGGMAYKWAQFNANGQKQPEQKKPAPPPEPAPRDLVQE
TEDALEALAGWKESGWLEKLVA