Protein Info for mRNA_1375 in Rhodosporidium toruloides IFO0880

Name: 9743
Annotation: K08139 HXT MFS transporter, SP family, sugar-H+ symporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 666 transmembrane" amino acids 126 to 146 (21 residues), see Phobius details amino acids 171 to 189 (19 residues), see Phobius details amino acids 201 to 218 (18 residues), see Phobius details amino acids 225 to 246 (22 residues), see Phobius details amino acids 258 to 277 (20 residues), see Phobius details amino acids 329 to 348 (20 residues), see Phobius details amino acids 427 to 449 (23 residues), see Phobius details amino acids 465 to 486 (22 residues), see Phobius details amino acids 494 to 514 (21 residues), see Phobius details amino acids 520 to 538 (19 residues), see Phobius details amino acids 572 to 589 (18 residues), see Phobius details amino acids 596 to 615 (20 residues), see Phobius details PF00083: Sugar_tr" amino acids 130 to 630 (501 residues), 405 bits, see alignment E=4.5e-125 PF07690: MFS_1" amino acids 135 to 452 (318 residues), 54.6 bits, see alignment E=8.7e-19 TIGR00879: MFS transporter, sugar porter (SP) family" amino acids 321 to 626 (306 residues), 263.4 bits, see alignment E=1.9e-82

Best Hits

KEGG orthology group: None (inferred from 57% identity to aor:AOR_1_570084)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (666 amino acids)

>mRNA_1375 K08139 HXT MFS transporter, SP family, sugar-H+ symporter (Rhodosporidium toruloides IFO0880)
MSSAASFGRLPVSGGSPSLASRRAARRWAATLRAEPAKWSIFVDGRLSPVASAKPFSNSS
GAPSFSSLSSALSPASIRLTMSRHSSDDFFAPEPKGQQTFVDHVDTIEQRNARSTGFKGL
IKDTRMLGIATMATLGGFLFGYDQGVVGNVLVLESFGADFPHIYMNASVKGWWVSTLLLA
AWLGSLLSGPLTDRLGRKRTIQWVTIIFVLGAALQAGATNNGFLFGGRAVAGLAVGTLTM
VVPPYIAELAPAHLRGSLVALQQLNITVGILLSYWIAYGTSHIGGTRCAPGVPYTGPVGA
DGNPTFDAYHDVPAGGCTGQSPASWRIPIALQILPAILLGIGMFWMPYSPRWLTEVGRDE
EAKNTLAYLRSSTVEDPAVVHEFLEIKAEVLIERELRHAKTAGKGGIRGMIQPYLDLVST
RSNFHRLWIGCSTMFFQQFIGCNAIIYYAPTIFASLGLDPNTTSLLATGVYGVCNMVSTL
PAVLLLDRLGRRKLLLAGSVGCFCSLVIVGSIVATCANDWAAHASAGRVAIVFVYLYDVN
FSYSWGPLGWVLPAEIFNLATRSTGTSLTTSTTWMSNFVIGLVSPMMLQNIAHGGTYFFF
AAFAVIGFISTYLFLPETRMKTLEEMDELFGMQRAQEYRDLERRIRAEVGLGKAGYAKNE
SKEQIV