Protein Info for mRNA_1471 in Rhodosporidium toruloides IFO0880
Name: 9839
Annotation: K08874 TRRAP transformation/transcription domain-associated protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (3720 amino acids)
>mRNA_1471 K08874 TRRAP transformation/transcription domain-associated protein (Rhodosporidium toruloides IFO0880) MAGPPSTSSAGRRQSAGPKATPGAFGAGSPLEGQSFETIADKLKDPSVDYKTKTNLATEL RDAIDMYQKDLDLGKLFDVLLPAFTDILRTGKPAFVSTSGEHKLRNLLIQILHRLPHVEP LRQHAPSLMSLLLKLLRIESEDNAVLCMKVIIDLHRTYSRPPPPSSAQPANAEPTPDPTV SQIEASVDEFLEIVADLFKNMGSVVEETFREATRQTRSQAGQAAADAQSPSSGGPPSLEG EGGAGNQPVVYAPAMRSFKLLQDCPASIVFIFQTYRPLVNKAITIFVPLVFEFIQMQAEP QRRKHESMEHGKSWVGICPEIPKDKRGAFQDMVMAQTKTMSFLAYIHRVSNTALSSYLNV LPEIAVRLMKDCPSEAVAMKRDLIIATRHILQSDLRTAFLSQIDTLLDEHVLTGNSVTGH ENLRPLAFSMLADLIHHCRADLTLPQLSRVVHTYCANVHDPTLASAIQTMCSKLLLNLID PIASKEPQEAVKILQRILLAFVSRMEAMAEVRDEWAKWSKAREPLPATMDKVRESEKEWR EWEQRQKEKGKGKADDADADGDHAMDSAGGGDAKDDEGAKEETKEEGDKMDVDGADEAQE AKVEKKKKDADAEPTLLKLDDVDIERAKPIRKAVIMVDPGPDPVKDARFLFRNLLFGFKT LGLALNRMGGQGPDAELMCRFFDAAVKCMVLFDPARDQGREQKEVMEVLTSTLVQTELVI FQEVVENRMGFFFDELIRNHELLVIPQSLLSNENVSQHFVAILFRFLSSRLPELGNSNKE NTSVMLRLYKMSFMAVTIFPEKNEPVLLPHLSNLIMNSLKLASQATEPNSYYLLLRALFR SIGGGRFEILYNEVLPLLQTLLEQLNALLKSADKSRKDLFAELILTVPVRLSVLLPYLSY LMRPLVHALQAGSELVSQGLRTLELCVDNLTQEFLNPLFAPVIDEVMAGLWKLLRPLPFN HQHAHTTMRILGKIGGRNRKGFEPPKLEWKNVGPEALLNVKFEGKDAAIRIGPIVDVALK IIRRGDVHYRRVAYQFLKYSVAVFLREGLLPGEPEETFGNVLKGLFDATRVDDFHEEANK YMIDLARVVFAFELGKEMPENPNLARQTLPLSSAFVDGVIENLCTVETPDMTKAAAQTKT IVEQLLAKREPGSTSSNKPDAPTALLHQMGSRLASHCYDPSWQRKCGAARGMLILISEVG VETKWIIEHEIEFTRALLFALKDMPGESPSNADMVVDTLLTLVRVCSTPVTPEDKEAARA TLNYLVGLLLVEVSSQVAPVRDAVKRALKIVSDNEGKPLTEMLTPVKDRLLGPIFTKPLR ALGFTMQIGHIDAVTYCITLDPPLIEVDDQLVRLLHEALGIADAEDVALLGGKVTHKTMA PLTQLRVVCVQLLSAALANPQLNTPAYNQTRIRALSVYFKLLYSKAPEVVDAAYHSLKQV MLAQGKLPKDLLQTGLKPVLMNLADHKKLSVASLHGLARLLELLTNYFKVEIGQKLVDHF RSLAIPADILRATAKQPSEDGELEVMAAIVNIFHLLPHPAAGMYLEDVVEMVVSVERLLK KLKTSIFTAPLAKFLALHPEKTTLFFFSRLGEERYVPTFRAIIAAEQSQPIRDYISDHVQ DLFGPCFDKDGDLGYHAAMVVRELISVDKQWIGRCEAVLPILITRWVSDIRRGRLKRQGI PHVQQLKEDQVVVEVFVAYLEQAEHIDLLFHLVEAYTYLTSADHTALSRFLTRHVALNEN VAFRRQILDRFLDIFDNENVTMPHKSAALRLLVNPILLVSYSRGEREQGLISAGWIAKVH AKVWHPLLVAPPELGTLDEEELRVELCHMTTLLIRSSPSLLDSVKKDVIKFGWMSIRFDD ISVTQTAYILIATFLAEYESPAKIVGQIYVALLRAHQPEARNLVREALDILAPALPKRMP GGTTSAPGQIPGWEYFTRKTLIEEGSTMPLLVNIYQLIVRHPDLFFASREQFFPHLVASL GKLTLSTTITPDTRVLTLDVIEVILKWEKKRLESAKQDEGKAENDDDGETAERSPKRAKT ERGASTAPSAASSGAGATYIPPPSLRDQVVNNLLRFISNSQEPVQRNNLVYRALALLREL IGPSVWGESNIKFSFFQRTFSTDVTEDTLGQMCNSAEILNVVSSYKPADWHVQNIAVLHG IVEKGFTSGEMRLTSSLRPVVERLFDHLPRNVTPDSTDVPAPAKAYIEWARSTVEEGLRA MTNLPAVILILQSWSKVEPERIDAFIPALVRVFTRYLKEHTASPTVVSSVDPNLRLLVSS LDVLRQRVSHLGEQRRWFLSGIVQLVEKSSNIDVCRFLLQMVRKWVFDKDEPYPTLKEKA GILSKMTSFENRNSEALQKDFLNLILDIYTDTSLARSELTFRLEPAFLMGCKVRDPIIRS KFLATFDKSLATGLFSRLHYIIGVQSWETLSETYWIHQALDLLLGAVDTKDPLFVPGSYL TSAKAPPVDFVKQLETYTTGEVLAAARKLLYADPNATHATWVSTFKTGWSCLSRSEQRHL TEFMVGLLVKDYHLRSVDRRPNVVQTLLQSSFACSPPLVLPPHVVRYHARTFNAWYTGIE LLQDTLESPRESDTVKETAMDALTELYAELNEDDLFYGLWRRRAAYNETNAALSWEQIGQ WAQSQVLHESAQITARSGVMPFTESELALWEDHWIITAQKLQQWDVLSDMAKNEGNKELL LECAWRLADWNQERPMIENALETMSPVGTPRRRVFETYLALLAAYSAKTPEEATNAKKMF AKLCDEGVQLSLRKWYYLPETVTQAHYPLLQTFQQFVELQEAQQIFASLAGTNAANLDTR SNELKSIVGTWRDRLPNLWDDINVWSDLVAWRQHVFSAINKAYLPLVPAPNAPGGQQNAS SFAYRGFHETAWIINRFAHVARKHHLSDVCITSLTKIYTLPNIEIQEAFLKLREQAKAHY QNPSELANGLEVINNTNLMYFNGSQKAEFFTLKGMFLAKLHLHDEANQTFNLAVSMDMSF PKAWAEWGEYHDRMFKENPADLNIAANAVSCYLQAAGLYKSAKVRKLLVRILWLLSLDDA AGTVSKAFDNYKGEIPTWYWITFIPQLLVTLSKSEARYVRVILLKIAKTYPQALFFQLRT TRDELSLTKRQWQQAEAVRLQAAKRAAEAAAANGEPAPAEGDGGADGGGQTLVTPGGTQL STAPANQRQPWDYIDEIMAVLKTAFPLLALSMEMIVDQISTRFKPAADEDIYRLISALLA DALQQYVNRAPFPTDDGLLTQATNGNIARFAESLHSSPVKEQFVKDFLTSKPTLREYLQR LQGWRDRYEAVLNKKAKRANLEASSHWLVEFQYQKFDEIEVPGQYLQHEDSNNNFVRISH FANKYDVQRGSGIYFRRLTILGQDGSIHQFMIQLPAPRTSRREERIMQLFRMLNCTLANR KESRKRNLQFTVPIVVPLSPGVRIVENDASVTTLQEILEDHVESMGLRKEDPVLAFTERI RTLHRHEPPLSRTDIWTARQEAFEELSVKMTPDDVLKKYMIKSMASPNDLWHLRKHMTTS LAAFIFMTYTMSMADRRPARVHISRATGKLYTSDMVPSIVPGKPELVHNEPVPFRFTPNM QRFIGPHGVEGLLTSSLIAIAGALTESEYDLEHRLSIFVREEINTWFTMSKSDQRTHLRE YTLSAIDAIVRKAKVVSAQYERARQPSSVVPVCQSVVELLIMASNPANLSKTDPLFVPNM