Protein Info for mRNA_1493 in Rhodosporidium toruloides IFO0880

Name: 9861
Annotation: KOG1981 SOK1 kinase belonging to the STE20/SPS1/GC kinase family

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 950 999 PF05794: Tcp11" amino acids 380 to 987 (608 residues), 313.8 bits, see alignment E=1.2e-97

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (999 amino acids)

>mRNA_1493 KOG1981 SOK1 kinase belonging to the STE20/SPS1/GC kinase family (Rhodosporidium toruloides IFO0880)
MESPYPPQLSLPSSANASSQDAGASASSSGPPASLPNTSTATSSASEPRQTHRKRTRTAD
EASQTGFECGPDEIEASGSVLGDDDARPRGLSEGGRPSRGELARRLADRAKVDERRGGWM
TRSVSDEGVETSAGVSRDEHAEKRRRLEGLQLGEGGARERTPTRRSRPSPIHIEPAYHAC
LPSPTTTATNLPSPHLGVFPTALVQSVDVAQTSILPPPASPCLPPPSAEIPQLPFSAAPP
SSPTLRTPFPSALPAARSQSRRRAKSLPASLSPVHPALSSPLSCSTQRRLLSTSPRPPGG
SSPASIAAHSPFSSTSPTQPSASPKTLSQDELVALHAFVISKVEGVLTTAGITTASLGPP
ITKDTLRELDLSEIMRNPQLRHDVVFDPNLMFRPNYDGERGERKRLTTEQYWVAVAREVS
IGCRCAAFRNNSLLPCICSCFGDETNPVHLSSRLHSRIFQLIVELRAIISTLLPGSPTPN
SPTPPSAATFDASSPSAAPSPAPTPNAREAVAEVLDPVHLTQQIAHGVADIPALARFLGS
TLKMHCAPMRDELVDAMVKVTCEGEGIVKGLRLCFEILELMKLDIANHQLRSLRPYLVSA
ALDFERRFFQTSAARRRRPLKVFERVGAWLESSATGLVAKDSAPRQLGASDVDKVVAHGL
LDLIFPPVDISSTPPTSLASLPETVMLDSYRLKAFHADSTDLTVMYLLSMLFQQLAVPAR
PSTEDMERLCKELWIVMTTSTGSPSSLVGPAASILGIPQGPPGHGISKLSSSAWRNGMQD
VLLQLAARAKQVNKVDAQPVSPAPLPDADTLKLVSSYFETNVKADGKLFQLLQKRLRETI
ELAVEEEMAKEKERGPLAFTGWWQSSREPATMTTGSIRRGSVIAGNKNGARPDADLMATS
SPVRGRKRSLGDRDQDVESTPSLEHVVAEKRQRTESSFSAKSSPFEAALQRNGLTALSSE
VRLLAGRIAKVASFNISVYRPLYEAILARLPSTDLATIS