Protein Info for mRNA_1528 in Rhodosporidium toruloides IFO0880

Name: 9896
Annotation: K06030 MFN mitofusin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 951 transmembrane" amino acids 716 to 736 (21 residues), see Phobius details amino acids 780 to 798 (19 residues), see Phobius details amino acids 820 to 838 (19 residues), see Phobius details PF01926: MMR_HSR1" amino acids 253 to 431 (179 residues), 40.5 bits, see alignment E=2.6e-14 PF00350: Dynamin_N" amino acids 254 to 430 (177 residues), 63.8 bits, see alignment E=2.2e-21

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (951 amino acids)

>mRNA_1528 K06030 MFN mitofusin (Rhodosporidium toruloides IFO0880)
MQSASVPLRHASEEPQEFPFVASSLQSPKPMSRRSSLLNSSPASAQVLFGKAWQGTEEEL
QRKHEDEQRAYGDKRELLIQSLDEASVLVKSLATFNQNKWTVHYPHQLGVSTVADAPTPP
HRAASSPSTPNARSAVKGARQAPLRRSASMFPEEAVAGEEQESPARPSPQRTYSLVDSPP
APTLSKDSTPAHPLSILSLDLKMGHPSTSTAQLPALIPSLSLSTLSQLLSRRLTTSLSHI
SSLRTRVLDSSSRVLVTGDLNAGKSTFVNALLRREVMPWDQQPCTTVFCEVLDASLNEGK
EELHAIRDVEKYDRSNPETFDVFSLEEVYDVQDTGDEYQIVKAYVHDGRAPVSEDEPNPS
FIKNGLVDISLIDAPGLNRDTLSTTALFARQSEIDVIVFVVSAENHFTLSAKEFLWNASR
EKAYVFIVVNKWGGIRDKARCMRVVGEQIKQLSPATWENRAELVHFVDAAEYVEGPAEVS
VEEPSAFDHLEQSLRSFVLLKRSKSKLAPAKHYLLNLLADLSTLASANVVAANDELSAAL
RELERIRPIHERLSAQRDEVEEGVDRVEETVVESVKSAAWSRLERALNYIAEGKVVPPAE
STIDADSRQVFEGTDSFDGPTELPPYPGVWGIWEWANDVKKTLVRALEAEVRAAEDDARF
ETVDGVKTVMNDLGDKYLPEDGETAGEAVQQEQAKNGRVFRPEVMFAKRRRGVGRLAARG
VSTGLGLGSAGLGVNWSVTDFDVSFFDMFDFERMTSHGNALRGRKEHKLIEDDVVEKGTL
VGLGLGSIGMVGSRIIGIKGTMGSLTRIIEMLGSKQARKWAGPVIGVLTVGLVVYVIVDL
PRAIPRNIGRKLQLSLSPPPALLSGSSSASSPPVTFASAHSDRIAREVRKVLRLAGWDLR
ERFRAALDKSAAERKEVEGVVARAEGALQFLEEFEGKVREGQSHVKVIDLD