Protein Info for mRNA_1553 in Rhodosporidium toruloides IFO0880
Name: 9921
Annotation: KOG1729 FYVE finger containing protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
No annotation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (2142 amino acids)
>mRNA_1553 KOG1729 FYVE finger containing protein (Rhodosporidium toruloides IFO0880) MAYPVDPGRTVTWAKHPEWEQELVSIIGELPRNEQLRVFAPATRKSAQWKKEKQEILQGI TADLFDARGDHDKAAKQVASVQRKLAQLAKEYSGFIRNLVYLPEYRATTNASINATFPTW DLLRPILRDHPDFQYWDENATPPAPQAANDEAADPYDPMQDVRYHDAAQAAAAPAAQPAQ PVAGPAYPNPALAHLYAPNQLPNHANNQPATPAAAGQKRVRRDSADATEGEARDARQAAA AAALRRADPLAAELFPTPSVNRVAGAAATPPVLAPPAQPAPAPAPAPPPPAQPAAQPAPP PAAPLAPLAREDSQLFASCPKCAFPLLDLSPSEAETHLRSCLDSSGATVTECPVCGMRMD GFTEREVEKHVDDCCKGVGGSGSKAAREHVVFIADAKTVPKDEKTGEALECIMCFDEFEP SQRLARLSCYCCYHEACIVEYWQNPSKFCPTHRELDTTQEIEMRNRFRIASSFPAVPSVR CANTRFACPRLAYSTHSLDRCKREELARTGGHFVPTAKSSLVIHSHPPRSLATRSCCRTC STQSPMASDSPAEPAQQPKPDSRAPSSSRSASFISADLNVRLSGRIVGDGETGRIEGLQV ELDQGGITVKYPQLLSVQTKPESQTLSSINTGERLLTLPTPFITASSGSSDSNEYDDAFE DDSGSSTPKKTVVTLHEGFLPASETEQIEQSPLFSSTFKILIDSPSFPAPHFDPASLAPP TPSVKPLDPTSASSAAAYGGILNSPTLQRALLSPLLSPQRRAASQGSDLSVPPLSLGLSR TSRASFSGAGERPRVQGGGQPSLVSLIPALAPPASGPSTASSSSTDPPHPSSVPRGPSLA TTLTHALSTSAKKTAEEILSLRRTHDAYQRRAKAELEILEQRIEIARQNGAGEGGEGVVR GFKTREEREKSVSASRSRERGDKDRKEEGKKAGSGSRSRTRAASSERRGESTAHPKSAYM DEEMSSRIREQDEREEEERGRSRSRSRGQPGGNGRQASVRGSSEQYAQSATAQRSRSRTK AVAEATAKAVEGAQQRGQSGSRERAGQSGGGASEERGRGRGPTRGENLPATLEEEGEEED DRGRSSTSTRSASAPRDSTTDTHNNLLSPSSAAQAVRGPSSSGATPTFIPSSHALVAIPE SEELSLPPSEAGDETEEGEGESRKQGGEDKEEEESDPPFEMDEDVDVEELDIGSSRQPAP LESPSLEIVNGDTPPPQSVAGQSRSRQPPSSTQPSSSFRPGSFQRASALSASYNALLASP GALAATKSPLSPPTVQPISPSVAAIRSYGSSTRSSSDFSPSRTAAALNSLDTLPPFSPPE AHAHLTSSARDDAENALAAATFEHATLSRGRRGGEGAGPDPREVRRGEQKIRDVLAMDVP TPSGQIDPATNAFVGSLPITLGRPSTINAALSSWRPDPERLWAQQRRERKTSISSRGEAG WVPPLKTGFGAPMPTQGGRAAAILPHQQASASSSTQPLEIGSPSTPRPVAGGSSLAQSLR HASFSHRAALNERGTNGGASEEAVEDADGQEDEEDDGEFVPPHLVADRKGRRSDEAMLSR SLLLLDAANTLSCSHTLSLALTVQHHLSRLHRPTAPLHSSHDHFSPLHTARKQQWHDFLT QSFALAPARQAEQASSAEHSHPASPDTLDTAHDVSPTTATATNDSNPSLDADVVQTSDKF AALRSHSPAARPLEDEPRIECPSVQKGDWRAYGRVKAQVVLWPEGTVGEKGVKAKKVREV LADKADEWVVEGTLWVTKNKDILLVLDRNIPPFHIDFSNLRASPTLSRRLSLSGLRRTIS RTSTTSGGEAREDTEEDKENTGGGVRGFVKKIVEAVKPRGASTSEGGDGLALTRTRSSHK SQRSVKERRKSHDASAGVARGGEEREQREEGTQGAQGGLAFSEPVIERREGPFPAYKGHS ITALYISSPYLIRTARFYAQHKPASPLSLGLPISTPPDDAVAQDPSREPREDLGLVPPVV EVDVAQPEEGRKYEGVGEGEGVRMREVTVGFVFPDVLLADEATDFHSRLEFLLRPSSPSG QPTTTTTGSSLFRTLSRGGTFTTTSPNAPPVPASTEEGGEIPSETATVEMLATAPKQRRR GSSFLRGMPQGDVPPRRAVTLTLCIVAALVVPPRSILSLPRT