Protein Info for mRNA_1674 in Rhodosporidium toruloides IFO0880

Name: 10042
Annotation: K07297 ADIPOR adiponectin receptor

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 653 transmembrane" amino acids 418 to 439 (22 residues), see Phobius details amino acids 458 to 479 (22 residues), see Phobius details amino acids 491 to 515 (25 residues), see Phobius details amino acids 521 to 541 (21 residues), see Phobius details amino acids 553 to 571 (19 residues), see Phobius details amino acids 582 to 603 (22 residues), see Phobius details amino acids 615 to 636 (22 residues), see Phobius details PF03006: HlyIII" amino acids 411 to 636 (226 residues), 153.7 bits, see alignment E=3.4e-49

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (653 amino acids)

>mRNA_1674 K07297 ADIPOR adiponectin receptor (Rhodosporidium toruloides IFO0880)
MSSVRRRGNTRPPTQRSASSTAVYSSSASPPPSASPVFLSNRKRSKSLYESATAQTSAGR
ALSYGSSLLESLDLPASLLGLRQYLAGKLEEAEKSLRALKAYVEESELEDLGLTSLGETE
DEYDDDEGSEAGGRQRLRTLSASSASDGEMEKLKGESGGRKAMLPAGRDEVAEEDEDLRD
EISALQAFISSASSFLKAMRDELPSLEADESAYLQFELSPDARAGLDRFLADHPLPSLPA
SSLRSRAASSAQAVLTRVSTELGTLRAALASLASSASSADPASYISASLRSSMPSTPSFS
DFSDLRSYFSAESKRLSNAISQLKDDTAGSLSAGLHAVQDGAAELSAYVKDQSHAVVDEA
MRMYHAALEIGRERLLRYEELPPEWRNNEHILTGYRYIPIEQWGTLLRSMFTWHNETINI
QSHFLGALSLVVLLVYYLFFSTSSPHALADPHPGDTAIAVLFVLSAMHCLLCSTTWHLMS
GCATSHWFRGAACVDYVGISGLIAASVAGATYYGFYSHPALAASYMCFNFIIGVTGMIVP
WQSWFNERKYKSWRIAFFVSLAASAVAPIAHRAAIYGGMETLWFYSPAIPSVVAYLIGLS
FYANQFPECCAPGHWHIGASHQLWHIAIVAAVWLHWKAMSDWSVSVAASLAAP