Protein Info for mRNA_1733 in Rhodosporidium toruloides IFO0880

Name: 10101
Annotation: KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 549 signal peptide" amino acids 1 to 47 (47 residues), see Phobius details PF03016: Exostosin" amino acids 105 to 280 (176 residues), 60.7 bits, see alignment E=7.3e-21 amino acids 351 to 495 (145 residues), 60.2 bits, see alignment E=1.1e-20

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (549 amino acids)

>mRNA_1733 KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1 (Rhodosporidium toruloides IFO0880)
MPKSSRADRPPPPASLSLLVRSLRTRRRSWIILLAGLLALVVYGRSERGKLVKSAHGIRE
LERRGVRFDRERDEDEVGVEFPPLPDLQDRDRLWPPDLSKPICKPKIFVYDLPPSLRLPQ
KTASQCRWSAYNSELLLHQLLAQPPTSERSSPDHPHLSLYTSDPNEADFFFVPLFPACYL
FDCWVKAGWTKTERCNVDEGYIQPVMRHIRETLPYWNRSAGADHLIPHPMDYVDGYYTET
SRAAMNGSSYLVTVGDVRPAPYGSHFRFYRDIVIPSSTHLLNSYYVNPLDYVDEDGHPLR
EPRGAADPRLKTQAVPTGVEIFQPSSQEAGAWRRRPSFRSLASKLVGGKGAERDRRTTLA
IFRGGVGTATDGERYALGIRSLFFPSDGDASTPPFSSTVHPGFSSLPGFDIAEQSENDDY
ARHLARSKFGLAPPGYTLDTTRIYEYLAFGVVPVFIGSGPTAGQVMPFANDVDWSSFSIS
IPRDRVHEMPRVLAQVSNDEYERLRRKVWEVGRMVVLEGREGNVWRLVARQLCRMKRLGV
ASGPEIANN