Protein Info for mRNA_1737 in Rhodosporidium toruloides IFO0880

Name: 10105
Annotation: KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 549 transmembrane" amino acids 30 to 46 (17 residues), see Phobius details PF03016: Exostosin" amino acids 105 to 281 (177 residues), 64.8 bits, see alignment E=4.1e-22 amino acids 352 to 495 (144 residues), 60 bits, see alignment E=1.2e-20

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (549 amino acids)

>mRNA_1737 KOG1021 Acetylglucosaminyltransferase EXT1/exostosin 1 (Rhodosporidium toruloides IFO0880)
MTGLSRADRPPPPASLTLIVRSLRTCRQRWIILLAGLLALVVYGRGGTRNALRSAHGKSE
LERSGVRFDRERDEDEVGIDFPPLPELQDGDRLWPPDLSKPICKPKIYVYDLPHSLRLPQ
KTVSQCRWSAYNSELLLHQLLTQPSTSEHPSPDHPHLSLYTSDPDEADFFFVPLFPACYL
FDCWVKAGWTKTERCNVDEGYMQPVMRHIRETMPYWNRSSGADHLIPHPMDYVDGYYTET
SRAAMNGSSYLVTVGDVRPAPYGSHFRFYRDIVIPSSTHLLNSYYVNPLDYVDEDGHPLR
EPRGAADPRRKTQAVPTGVEIFQPSPQEAGAWPRRPSFRSLASKLVGRRVIERDRRTTLA
IFRGGVGTATDGERYALGIRSLFFPSSGNASTAPFSSTIHPGFSSLPGFDIAEQSEYDDY
ARRLARSKFGLAPPGYTLDTTRIYEYLAFGVVPVFIGSGPTAGQVMPFANDVDWSSFSIS
IPRDRAHETPRILAQVSDDEYERLRRKVWEVGRMVVLEGREGNVWKLIARQLCRMKRLGI
AAGPEIANN