Protein Info for mRNA_1955 in Rhodosporidium toruloides IFO0880

Name: 10323
Annotation: KOG0379 Kelch repeat-containing proteins

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 722 PF13418: Kelch_4" amino acids 57 to 100 (44 residues), 29.3 bits, see alignment 2.1e-10 amino acids 135 to 194 (60 residues), 25.7 bits, see alignment 2.9e-09

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

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Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (722 amino acids)

>mRNA_1955 KOG0379 Kelch repeat-containing proteins (Rhodosporidium toruloides IFO0880)
MLSSRPVSTSSSSTASASIRAPPVSSSPRPAGQISSAADLTASVRRTTGDRPPPLVGCSV
TLVGEDEVYVFGGRLVPTRTMVATLYCLDLRTLEWRKVWPAKSEGEVVASDDEPSPPGAF
EGGSSDEAETFAPQARYFHSACAWEDKLVIFGGEGYGPTAPGTTPDTPSPENDPTLALKT
LDDVCIWDTKAGKWVDGATTCEEGVERPAARYAHLGVVTSVKVEEGEGEKGEAREKAVML
VMGGQDIRNTYLHSMNVLDLNSMTWIQASNWDRHIGTYRAVATCPRYTVVPTAVSQPVPA
SSDEAVDDAQRAVRGERGAEKALGLNEGESLIQLSHSTIPPASDPEPLILFSNFNFTQVR
RDLDLIASPLSPATPLEATSLSSSFSGTSLPPGLRFPTGAIVGRHLLVFGTFLSSAINNF
SIWALDLGPGGAKGVKERIEKGEKLEWTRVDPGSVLAKGSWNRAVAWRNSVVVLGDRERD
IASDYDHRQTNFAHVAFIDLESFGIYQPPPQTLPPIAQSFGLLTLAQPFLSDFEIICSDG
KRLACSRKVLTDRWPWFAAKMEEFRSRASAVQAAQQLGKSQPVENGATTEAPASTAADDL
RLTPRTLDLPEASSVVQAFLQYLYTLTLCTPLQLHPPVLAALAIFSRTYEDDGLWALCVH
ALHGVLEKEAQAAPLVYEAATMSGSTALQIRALRTMLSNPAVRMRQSPRPPSQPQGRPAV
AA