Protein Info for mRNA_2002 in Rhodosporidium toruloides IFO0880

Name: 10370
Annotation: HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51971

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF13450: NAD_binding_8
  • amino acids 14 to 69 (56 residues), 37.5 bits, 2.4e-13
• PF01593: Amino_oxidase
  • amino acids 20 to 275 (256 residues), 43 bits, E=4e-15

Best Hits

KEGG orthology group: None (inferred from 69% identity to mgl:MGL_1288)

MetaCyc: 67% identical to UDP-galactopyranose mutase subunit (Aspergillus fumigatus)
UDP-galactopyranose mutase. [EC: 5.4.99.9]

Predicted SEED Role

"amine oxidase, flavin-containing"

MetaCyc Pathways

• superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis (5/6 steps found)
• UDP-α-D-galactofuranose biosynthesis (2/2 steps found)
• O-antigen building blocks biosynthesis (E. coli) (7/11 steps found)
• mycolyl-arabinogalactan-peptidoglycan complex biosynthesis (2/18 steps found)
• superpathway of mycolyl-arabinogalactan-peptidoglycan complex biosynthesis (10/33 steps found)

Isozymes

No predicted isozymes

Use Curated BLAST to search for 5.4.99.9

Protein Sequence (502 amino acids)

>mRNA_2002 HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51971 (Rhodosporidium toruloides IFO0880)
MAATAPTQSVDVLIVGAGPTGLGAAKRLHQLKHTNFTVVDAQAEAGGLASTDVTPEGFLF
DVGGHVIFSHYLYFDDCINEALPKPDDWYEHERVSYVRSKGVWVPYPYQNNITMLPVEEQ
VRCIEGMIDAAEERVRAATKPRNFDEWIVRMMGVGLADLFMRPYNFKVWATPTSEMQCEW
LGERVAAPSLKLVVSNVLNKKVAGNWGPNATFRFPARDGTGGIWKAVAKTLPQERFQFGK
SVQKIEASQKIAHLSDGTTISYRSMISTMPLDQITEMSDELENLRSTSRELVYSSTHVIG
VGIRGVLPPRIGDKCWLYFPEDDCPFYRATVFSNYSPYNCPQADIKLRTIQTADPKLSSG
VDTQTERAGPYWSLMLEVSQSTQKPVDEANLLAESIQGLVNTGLLQPEDEIVSTYHRKFH
HGYPTPSLKRNGQLAVLLPELREKYSIWSRGRFGSYKYEVANQDHSFMVGVEAVDNVLFG
ANELTLEQPDYVNGRRNTERRL