Protein Info for mRNA_2059 in Rhodosporidium toruloides IFO0880

Name: 10427
Annotation: K13509 AGPAT1_2 lysophosphatidate acyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 298 transmembrane" amino acids 12 to 35 (24 residues), see Phobius details amino acids 48 to 65 (18 residues), see Phobius details TIGR00530: 1-acylglycerol-3-phosphate O-acyltransferases" amino acids 62 to 193 (132 residues), 124.4 bits, see alignment E=1.2e-40 PF01553: Acyltransferase" amino acids 65 to 193 (129 residues), 106.1 bits, see alignment E=5.7e-35

Best Hits

KEGG orthology group: K13509, lysophosphatidate acyltransferase [EC: 2.3.1.51] (inferred from 49% identity to pcs:Pc13g04040)

Predicted SEED Role

"1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51)" in subsystem Glycerolipid and Glycerophospholipid Metabolism in Bacteria or Phosphate metabolism (EC 2.3.1.51)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.1.51

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (298 amino acids)

>mRNA_2059 K13509 AGPAT1_2 lysophosphatidate acyltransferase (Rhodosporidium toruloides IFO0880)
MLSRFVAPIRYYLRLTTFLVGLAANAMFGAIMALPMSLVGKGKDNQWLVARSFVNTVAPL
VGVKFRVEGREHLDKANPAVLVGNHQTMVDILYMGAVFPKGTSVMAKRELQWTPILGQWM
TLSKAVFVNRAKREDAVKVFAKVAAKMKKNSLSLWIFAEGTRSASPTPSLLPFKKGAFHL
AVQAGLPVVPIVCENYAHVYHAKAKRFNDGEIVVRVLEPIPTGGYTSSSADIARLTELTR
DRMLEAIEDLGRKRQEQLRLAGGQGHGEGEREALLAGQAGRASTSGETASARIEAPSE